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EMAGE:4483

Tnfrsf19 tumor necrosis factor receptor superfamily, member 19 ( MGI:1352474)
TS15 (9/5 dpc)
in situ hybridisation

Data Images
EMAGE:4483
Supplementary Fig4O. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2006.05.002] Dev Biol 297: 141-157, Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Copyright 2007

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: mb - midbrain; r1 - rhombomere 1. Arrowheads point to expression detected near the MHB and in the diencephalon.
Expression Pattern Description
Spatial Annotation:
EMAGE:4483Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4483_wholemount_moderate_3D_1.wlz
4483_wholemount_weak_3D_1.wlz
4483_wholemount_notDetected_3D_1.wlz
4483_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4483_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
diencephalon
detected detected
Tnfrsf19 expression was detected near the MHB and in diencephalon.
future midbrain
detected detected
regionalTnfrsf19 expression was detected near the MHB and in diencephalon.
future hindbrain
detected detected
regionalTnfrsf19 expression was detected near the MHB and in diencephalon.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Tnfrsf19 probeA
Entity Detected:Tnfrsf19, tumor necrosis factor receptor superfamily, member 19 ( MGI:1352474)
Sequence:sense strand is shown

>Tnfrsf19 probeA
CTGAAGGCCATCTTCCTGACGTGGAGGTGTGGGTCTGGACAAGCCTGTGATGAGGCCTACAGACTGAGCA
GTCTTGGTGTCTGGAAGCAAAAATAAATCTGAACCAAACTGACAACATTTCCATCCTTTCAGCCACTAGC
TTCTGAGCCAGACCAGCTGTAAGCTGAAACCCCAGCAAGAAGCAAGGAGAGACTGACTGTAGGCGGCCTT
GGGACATGTGCTTCTTCCCTAAGCGAGAACCTTAGCTGGGGCCAATTTGAAGGACCCATGGGTGGAATGT
GCTGCCTGTGAGCTTGTGGGCACAGCAGGACCCAGCCTGGCTCCTTCTTATGTCCACGGTGAATGTGGTT
TCACAAGACCCAGAG
nt 1374 - nt 1738 of AB040432.1
Notes:The Tnfrsf19 (Trade) probe template used in this study by Jukkola et al., 2006 [PMID:16782087] is indicated as that previously described by Pispa et al., [PMID:12972005] i.e: "The TNFRSF19 probe was made by cloning a 365 bp PCR fragment from mouse TNFRSF19 (nt 1374-1738, GenBank accession number AB040432), into pCRII-TOPO (Invitrogen)."
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9/5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, 2006 [PMID:16782087] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2006.05.002] [ PMID:16782087] Jukkola T, Lahti L, Naserke T, Wurst W, Partanen J 2006 FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Dev Biol (297):141-57
 [ doi:10.1016/S1567-133X(03)00092-9] [ PMID:12972005] Pispa J, Mikkola ML, Mustonen T, Thesleff I 2003 Ectodysplasin, Edar and TNFRSF19 are expressed in complementary and overlapping patterns during mouse embryogenesis. Gene Expr Patterns (3):675-9
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE