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EMAGE:4484

Tnfrsf19 tumor necrosis factor receptor superfamily, member 19 ( MGI:1352474)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4484
Fig2K. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2006.05.002] Dev Biol 297: 141-157, Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Copyright 2007

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: The MHB is marked with a white arrowhead; di - diencephalon.
Expression Pattern Description
Spatial Annotation:
EMAGE:4484Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4484_wholemount_moderate_3D_1.wlz
4484_wholemount_possible_3D_1.wlz
4484_wholemount_notDetected_3D_1.wlz
4484_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4484_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
diencephalon
strong strong
strong Tnfrsf19 expression was detected both in the midbrain-R1 region and in the diencephalon.
midbrain
strong strong
strong Tnfrsf19 expression was detected both in the midbrain-R1 region and in the diencephalon.
rhombomere 01
strong strong
strong Tnfrsf19 expression was detected both in the midbrain-R1 region and in the diencephalon.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Tnfrsf19 probeA
Entity Detected:Tnfrsf19, tumor necrosis factor receptor superfamily, member 19 ( MGI:1352474)
Sequence:sense strand is shown

>Tnfrsf19 probeA
CTGAAGGCCATCTTCCTGACGTGGAGGTGTGGGTCTGGACAAGCCTGTGATGAGGCCTACAGACTGAGCA
GTCTTGGTGTCTGGAAGCAAAAATAAATCTGAACCAAACTGACAACATTTCCATCCTTTCAGCCACTAGC
TTCTGAGCCAGACCAGCTGTAAGCTGAAACCCCAGCAAGAAGCAAGGAGAGACTGACTGTAGGCGGCCTT
GGGACATGTGCTTCTTCCCTAAGCGAGAACCTTAGCTGGGGCCAATTTGAAGGACCCATGGGTGGAATGT
GCTGCCTGTGAGCTTGTGGGCACAGCAGGACCCAGCCTGGCTCCTTCTTATGTCCACGGTGAATGTGGTT
TCACAAGACCCAGAG
nt 1374 - nt 1738 of AB040432.1
Notes:The Tnfrsf19 (Trade) probe template used in this study by Jukkola et al., 2006 [PMID:16782087] is indicated as that previously described by Pispa et al., [PMID:12972005] i.e: "The TNFRSF19 probe was made by cloning a 365 bp PCR fragment from mouse TNFRSF19 (nt 1374-1738, GenBank accession number AB040432), into pCRII-TOPO (Invitrogen)."
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jukkola T; Lahti L; Naserke T; Wurst W; Partanen J, 2006 [PMID:16782087] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/j.ydbio.2006.05.002] [ PMID:16782087] Jukkola T, Lahti L, Naserke T, Wurst W, Partanen J 2006 FGF regulated gene-expression and neuronal differentiation in the developing midbrain-hindbrain region. Dev Biol (297):141-57
 [ doi:10.1016/S1567-133X(03)00092-9] [ PMID:12972005] Pispa J, Mikkola ML, Mustonen T, Thesleff I 2003 Ectodysplasin, Edar and TNFRSF19 are expressed in complementary and overlapping patterns during mouse embryogenesis. Gene Expr Patterns (3):675-9
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE