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EMAGE:4517

Lrp4 low density lipoprotein receptor-related protein 4 ( MGI:2442252)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4517 EMAGE:4517
Fig3D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2005.11.013] Gene Expr Patterns 6: 607-612, Yamaguchi YL; Tanaka SS; Kasa M; Yasuda K; Tam PP; Matsui Y. Expression of low density lipoprotein receptor-related protein 4 (Lrp4) gene in the mouse germ cells. Copyright 2005. Fig3D'. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2005.11.013] Gene Expr Patterns 6: 607-612, Yamaguchi YL; Tanaka SS; Kasa M; Yasuda K; Tam PP; Matsui Y. Expression of low density lipoprotein receptor-related protein 4 (Lrp4) gene in the mouse germ cells. Copyright 2005.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotation: FL - forelimb. The boxed region in D is shown at higher magnification in D'.
Expression Pattern Description
Spatial Annotation:
EMAGE:4517Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4517_wholemount_moderate_3D_1.wlz
4517_wholemount_possible_3D_1.wlz
4517_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4517_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
forelimb bud
detected detected
genitourinary system
detected detected
Expressed in urogenital ridge
branchial arch
detected detected
not shown
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Lrp4 probeA
Entity Detected:Lrp4, low density lipoprotein receptor-related protein 4 ( MGI:2442252)
Sequence:sense strand is shown

>Lrp4 probeA
GATGAGCCTGACGGTCATCCCTGCTCCCTTGTACCTGGCCTCGTACCTCCTGCTCCCAGAGCTACCAGCA
TGAATGAGAAGAGCCCAGTGCTACCCAACACGCTGCCCACCACCTTACATTCTTCTACCACCAAGACCCG
CACCTCTCTGGAGGGGGCAGGAGGAAGATGCTCTGAAAGGGATGCCCAGCTGGGCCTCTGTGCACATTCC
AATGAAGCCGTCCCTGCTGCTCCAGGTGAAGGACTGCACGTCAGCTATGCCATCGGTGGACTCCTCAGTA
TCCTGCTGATTTTGTTGGTGATCGCGGCTTTGATGCTATACAGACACAGGAAATCCAAGTTCACGGATCC
TGGAATGGGAAACCTGACCTATAGCAACCCCTCCTACCGAACTTCCACTCAGGAAGTGAAACTGGAAGCA
GCTCCCAAGCCAGCCGTGTATAATCAGCTGTGCTATAAGAAAGAGGGTGGACCTGACCACAGCTACACCA
AGGAGAAGATCAAGATTGTAGAGGGAATCCGCCTCCTGGCTGGGGATGACGCTGAATGGGGTGACCTCAA
GCAACTGCGCAGCTCCAGGGGGGGCCTTCTACGGGATCACGTATGCATGAAGACAGACACAGTGTCCATC
CAGGCCAGCTCTGGCTCCCTAGATGACACGGAGACAGAGCAGCTGCTTCAGGAAGAGCAGTCTGAGTGTA
GCAGTGTTCACACTGCAGCCACTCCGGAGAGACGGGGCTCTCTGCCAGACACAGGCTGGAAACACGAACG
CAAGCTCTCCTCAGAAAGCCAGGTCTAAGTGCTGCCCA
nt 4921 - nt 5728 of NM_172668.2
Notes:The Lrp4 probe used in this study by Yamaguchi et al., 2006. [PMID:16434236] is described by the authors as "the P1 riboprobe which was an 808 bp PCR fragment targeted to the 3' end of Lrp4 coding region (from 4921 to 5728 bp, Fig. 1B)". The position of P1 is shown schematically in Fig1B. Elsewhere in the paper the authors refer to the sequence in Fig1B as NM_172668. Editors Note: there are two versions of NM_172668: NM_172668.1 (3267 bp) and NM_172668.2 (7737 bp). The authors are referring to NM_172668.2 as NM_172668.1 is shorter in length than the probe start/end co-ordinates given by the authors.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:ICR x B6D2F1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Yamaguchi YL; Tanaka SS; Kasa M; Yasuda K; Tam PP; Matsui Y, 2006. [PMID:16434236] . Indexed and spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2005.11.013] [ PMID:16434236] Yamaguchi YL, Tanaka SS, Kasa M, Yasuda K, Tam PP, Matsui Y 2006 Expression of low density lipoprotein receptor-related protein 4 (Lrp4) gene in the mouse germ cells. Gene Expr Patterns (6):607-12
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE