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EMAGE:4518

Lrrc10 leucine rich repeat containing 10 ( MGI:2448063)
TS14 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4518
Fig1d. Copyright: This image is from [doi:10.1002/dvdy.21225] Kim KH; Kim TG; Micales BK; Lyons GE; Lee Y, "Dynamic expression patterns of leucine-rich repeat containing protein 10 in the heart." Dev Dyn 2007 236(8):2225-2234, and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4518Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4518_wholemount_possible_3D_1.wlz
4518_wholemount_notDetected_3D_1.wlz
4518_wholemount_strong_3D_1.wlz
4518_wholemount_moderate_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4518_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
heart
detected detected
Upon the completion of the looping process, the heart showed cardiac-specific expression of Lrrc10 at E9.5
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Lrrc10 probeA
Entity Detected:Lrrc10, leucine rich repeat containing 10 ( MGI:2448063)
Sequence:sense strand is shown

>Lrrc10 probeA
AAGGGTTCCCGAGCAGTGAGCACAGCCAGCCCACTCCCTGACAGAGTTGGTGGGCAGGGGCTCGCCTTGC
AGCCCGTTTCACATGGGAAACACCATCCGGGCCTTCGTGGCTTTCATCCCCACCGACCGCTGCCAGAGTT
ATGTGGTGGGAGACCTCCGGGAGATGCCCCTGGACAGGATGGTGGATCTGAGCGGGAGCCAGCTGCGTCG
CTTCCCACTGCACGTGTGCTCCTTCACGGAGCTGGTGAAGCTCTACCTCAGCGACAACCACCTTCACAGC
CTGCCTCCCGACCTGGCACAGCTGCAGAACCTGCAGATCCTGGCCTTGGATTTCAACAACTTCAAAGCTC
TCCCCCGGGTGGTGTGTACCTTGAAACAGCTCTGCATCCTCTACCTGGGCAATAACAAACTCTGTGACCT
CCCGGATGAGCTCAGCCTGCTCCAGAACCTACGGACCCTGTGGCTCGAATCCAACTGCCTCACCCGGCTG
CCCGATGTGGTGTGTGAGCTGAGTCTCCTTAAAACCCTGCATGCCGGTTCCAACGCCCTACGTCTGCTAC
CCGGCCAGCTCCGGCGCCTGCGCGAGCTCAGGACCATCTGGCTCTCCGGCAATCAGCTAGCTGACTTCCC
CTCGGTACTGCTTCGCATGCCCTTTCTGGAGGTGATCGACGTGGATCGGAACAGTATCCGCTACTTCCCC
AGCCTGGCCCACTTGACAAATCTGAAGCTGGTCATCTATGACCACAATCCTTGCAGAAATGCCCCCAAGG
TGGGCAAAGGGGTTCGCCGTGTTGGGAGATGGGCAGAGGAGACACCAGAGCCTGACCCCAGAAAAGCTAG
GCGGTACGCACTGGCCAAGGAAGAGAATCAAGAGCCACCTCCTCCCCTTCTTCCTTCCAGCTCTTGAACA
GCTGAGGTTGAAGGCCAATTCAAAGGTTACCCCACTGCTCCGAAGGCATCTCATTAGAGCGGAAGGGATG
GTCCTGGCTCATCCCAGGGCTGATGGAGAGAAAGCCAGGTGAGATGCTGTAAAGGAATAGGGCGAAGAAA
ACATTTCCAGCCCCCAGCACCTCTTCCTAGGGGGAAGGTGTGTGCTGTTGCTGGCCTGGAATCCAGGGTG
ACTGTCACTCCTGTGCCAGAAGCAGTTCCTTCACACGAGCTATTTTGAAACACCAAAGAACAAGACCAGC
CACAGCACTCTTCCACCACGCAGGAGTAGCTGGTCACAAGGCTGGTGAGTGCTTCAAAGACTGTATTTGT
TAAAATAAAGAAAACAACGCCACCAGCTGCTCAGTGGCCTGTCTCTAGCTCTCTCTAGCTCTCATGCCTC
TTTCCTTCCCGAGAACTTCTGCATAGTACCAATGTACTGCTGTTACTAATTTGGTTCCTGAAAGGGACAA
CTCTACCCAATCAGTCTTGATTCGAAGG
nt 1 - nt 1428 of NM_146242.2
Notes:The Lrcc10 probe used in this study by Kim et al 2007 [PMID:17626279] is described as "antisense cRNA probe for full-length Lrrc10". Editors note: elsewhere in this paper the authors discuss cloning of a 'full length' clone and state that "the nucleotide sequence of Lrrc10 is identical to the reported cDNA sequence (gi:113930741)". GI:113930741 = NM_146242.2.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Kim KH; Kim TG; Micales BK; Lyons GE; Lee Y. 2007. [PMID:17626279] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.21225] [ PMID:17626279] Kim KH, Kim TG, Micales BK, Lyons GE, Lee Y 2007 Dynamic expression patterns of leucine-rich repeat containing protein 10 in the heart. Dev Dyn (236):2225-34
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE