EMAGE mouse gene expression spatial database

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EMAGE:4532

Maml3 mastermind like 3 (Drosophila) ( MGI:2389461)
TS15 (9.5 dpc)
in situ hybridisation

Data Images


Fig4E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2007.02.007] Dev Biol 305: 172-186, William DA; Saitta B; Gibson JD; Traas J; Markov V; Gonzalez DM; Sewell W; Anderson DM; Pratt SC; Rappaport EF; Kusumi K. Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model. Copyright 2007

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Notes:

Image annotations: (E) asterisks - expression in the first pharyngeal arch and caudal midbrain; (F and G) arrowheads - expression within the PSM (pre-somitic mesoderm).

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4532_wholemount_moderate_3D_1.wlz

4532_wholemount_possible_3D_1.wlz

4532_wholemount_notDetected_3D_1.wlz

4532_wholemount_strong_3D_1.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4532_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

tail unsegmented mesenchyme

strong

Strong expression found in pre-somitic mesoderm

1st branchial arch

detected

future midbrain

detected

regional

Expressed in caudal midbrain

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	Maml3 probeA
Entity Detected:	Maml3, mastermind like 3 (Drosophila) ( MGI:2389461)
Sequence:	sense strand is shown >Maml3 probeA CAGCATTCCAATCAGAGTGGAATGGGCATCCCACACAACCAATCCCAGGGACCCAGGCCGCCAGCCTCCA GCCAGGGGGTCGGCATGGGGAGCGGCTTCGGTCAGAGCATGCTGGTGAACTCGGCTCTCTCGCAGCAGCA CCAGCAGCTGAAAGGGTCTGTGGGCCAGGCCTTGCCTAGGCCCCAGGGCCCTCCAAGGCTTCAGAGTGTC ATGGGAACCGTCCAGCAAGGAGCACAAAACTGGCAACAGAGGAGCTTACAAGGGGTGCCTGGGAGGACTA GTGGGGAGTTGGGACCATTCAACAATGGCGCCAGCTACCCATTGCAAGCCGGTCAGCCAAGACTGACCAA ACAGCACTTCCCACAGGGGCTGAGCCAGCCCGTCATGGATGCTAACACTGGCGCAGTGAGAACCCTCAAC CCAGCAGCTATGGGACGTCAGATGATGCCAACCCTGGCAGGACAGCAGAGTGCCAGCCAGGTGAGGCCAT TGGTCATGCCTGGTCTGAGCCAGGGTGTCCCTGGCATGCCAGCATTCAGCCAGCCCCCAGCACAGCAGCA GATAGCAGGTGGCAACTTTGCTGCGAGCAACCAGGGCCAGGCCTATGAGCGGACCCCTGCTCAGGACATG TCATACAGTTATAGCGGCGAAGGTGTCGGGGCTGCCTTCCCTGGCCTCCCAGACAGTACAGACCTCGTGG ACTCCATCATCAAAAGTGGCCCAGGGGATGAATGGATGCAAGAGCTTGATGAACTGTTTGGTAACCCCTA GTCAGGAGGAGCCCTAAGAGCTGTAGAAGCCTCACAAGTGGAAAGGAAACAGGATGGAGACCCATCCTTG TTTTTTTTGTTTTTTTGACCCACGTAAATTGAGAACATGACATCCGGCTGACAGTAGAAGGCACAGGTGT CCATCCCCAGCTCCGTGGGGGGCATCGTTCCACCTGACTTCCACAGAGCAATCAAGTAGAGAGGACGTGC CGATACCTGCCCGCAGAGAAGGGATGTAGAGAGCAGGTGGGGAAATCGAGGCAACGGGAGCTCCTCTGCT AAGCACCCCTGGGATCTTCTGGTCCAGAAGGAGCTGTTCCAGCCCAGAGGGACCATGGCCCAAGATGAGG TCCCCTTAGGCCTTCCTGCCTCAGGTCCCGAGACCTCAGCTTTGGAGATGAGAGATGGAGCCTCGGCCAA AAAAAAAAAAAAAATCCCGGCATGAAGATGCACACGTGCCATGTGCATAGGTCAGAAGGAGATGTGTGCT TCCAGACACGTTCCTGGATTCGGAGGCAGGAACAAAGAACTGTGAGCTCACCTGAGCTGGCCCTAGGAAC CAAGCCAAGATCCTCCAGGCCTGTCTGTCTCCTGCCCAGCGACGACCCTCAGGGATGGTAAGGTGTTGCT GCCAGCCACCTCACCAGGATAGCCAACTATGCTTAAGAAGGGCCCAGCTCGTAGCCCTGATGGTCAGCTT CAGCTGGAGGCCATGGTGGCCATCACTCTAGTTGAGCTCTCATCCAGTTTAACACATCTGGCTGGTTTTC CTATGCTTATGGCCACATGGGTGGGAAGACTTCCTGCTGAGTTCAGTGTCTGCCAAGCCGGGCCCCATCC ACACTCACCCCTGCCTCCACTCCTCCCGGTCTCTATGCCAGCCTGCCTTTATCTCTCCCTCCAGACTTCC AGACTATCCGGGAAGTGTTGCACTGAGGCAGAGTCTACGTAACTGCAAGGATATACACAGTGCCTGGCGT GCGAAGGTGATACTGGAATCTCTTCCACCACGTGGAAAGTCAACTGTCTCCACCAGAGCAGAGTGGGCTG GCTGCACTGATAGGACCTGCCGGTTTATAAGAGCCACACCCATACTCCTGCTGTCCCCAGGGAGGAATGG CCTGAAGATGCCCAGTTCTTTCAGATGGTGTCATCGATGACACTCCAGAATCAGCCTTGCTTGTCAACTC CAGCATCAGGAAGACAAATATCAAATGTGAGAGATGGAAAAGCTGAACTGCATAACTCCGTCTTAACTAT CTGGATGCTGAAGAGAGGAAAGGGAGGTGTGGCCGCTATCCTAATGGCGCTCACTCCACTTCCAAAGCTG GGCAGCCATTCTCGTTGGAACTCATACATGCCTGCCGGAGTGAAAACTAAGAAGTGAACAGTCTCCATGG TCACAAGCCTTGTCCCTTGGTCTTTACCTCCCCTCCCACAGTCCCATCTTGGAAGTCATGTGATGTTTGT CTGTGTTGTTTACTTTCCTCCTGGCCACACACACACACACACACACACACACGTGCGTGCGCATATCAGA GCACACATACATCCTACAAACTGGCTTCCTTCTCTGTCTTCACATACATCTTACTACAGAAGACCGGAGC CTGTGGGGACTTAAGTGGCCATACCTAAGAAAGTGCAGACAGACAGGGTGCACTGCAGTAGAAAGCTGAG GTGAGGTGCCAGGGAGAGGGGGAGAGAGGGTAACCCTTGGTTTGTCCTCCATATCCCCCAGAGTTCCAGA CCTGCTCAGACAGGAAGTAAAGCCAGAGGTACCAGGGTGAGGAGCTGTGTGCCTCTCCAAAGAGGTGGTG GCAAGGAGACTGTGACCTCCCGGAATGGGGAGGAACTGCCACTAGGGAAACACATGGAAACCAAAAAATA AAAATTAAAAAAAATAGTAAATCAAAAAAGCCTAGAATACAAATTTATCACTTTTTCCTGCCAGGTACAG GGAAGAAATGTACAAGCAATGATGAGAAGCTGGAGGTGGCGAGAGGGGGCTTGTTGTCTTCTAAAGCCTC CTGCAAGTGCCCCGTCTGAGGACCAACTAATAGAGTGGTAGATTTTAATGAGCTTGTTTTGGTTTTGTTT TTACTACGGTGCTGATGTATATGTAATGTCTAAAAAAAAAAAGCTATTTGTAAATAAGTTTTTACAATGC TACAGATATCACTGGGTCTACTATATGTAAAAAGTATACATATAAAAATATATATATATAATGTTTGTTT AAAAAAAAAAAAAAAAAAAAAAAA
	nt 1 - nt 3034 of BC049812.1
Notes:	The Maml3 probe used in this study by William et al., 2007 [PMID:17362910] was "generated from the IMAGE cDNA clone 6506044".
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Age:	9.5 dpc
Theiler Stage:	TS15
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

Staining procedure:

alkaline phosphatase + NBT/BCIP

General Information

Authors:	William DA; Saitta B; Gibson JD; Traas J; Markov V; Gonzalez DM; Sewell W; Anderson DM; Pratt SC; Rappaport EF; Kusumi K. 2007. [PMID:17362910] . Indexed and spatially mapped by EMAGE
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/j.ydbio.2007.02.007] [ PMID:17362910] William DA, Saitta B, Gibson JD, Traas J, Markov V, Gonzalez DM, Sewell W, Anderson DM, Pratt SC, Rappaport EF, Kusumi K 2007 Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model. Dev Biol (305):172-86
Links:	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source