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EMAGE:4551

Lix1 limb expression 1 homolog (chicken) ( MGI:1913893)
TS14 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4551
Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(02)00018-2] Gene Expr Patterns 1: 199-203, Moeller C; Yaylaoglu MB; Alvarez-Bolado G; Thaller C; Eichele G, Murine Lix1, a novel marker for substantia nigra, cortical layer 5, and hindbrain structures. Copyright 2002

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: fl, forelimb bud; h, heart; mc, mesencephalon; pc, prosencephalon; rc, rhombencephalon.
Expression Pattern Description
Spatial Annotation:
EMAGE:4551Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4551_wholemount_moderate.wlz
4551_wholemount_weak.wlz
4551_wholemount_notDetected.wlz
4551_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4551_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
regionalExpression is in the ectodermal component of the primitive streak.
future midbrain
strong strong
regionalExpression is dorsal.
future hindbrain
strong strong
regionalExpression is in the dorsal metencephalon.
prosencephalon
strong strong
regionalExpression is dorsal.
forelimb bud
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3714367
Entity Detected:Lix1, limb expression 1 homolog (chicken) ( MGI:1913893)
Notes:The Lix1 probe used in this study by Moeller et al., 2002. [PMID:12638132] was transcribed from a Lix1 cDNA clone (Seq accession AF351204), however it is not specified whether the probe was transcribed from the entire cloned fragment or a shorter length.
Chemistry:DNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Moeller C; Yaylaoglu MB; Alvarez-Bolado G; Thaller C; Eichele G. 2002. [PMID:12638132] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(02)00018-2] [ PMID:12638132] Moeller C, Yaylaoglu MB, Alvarez-Bolado G, Thaller C, Eichele G 2002 Murine Lix1, a novel marker for substantia nigra, cortical layer 5, and hindbrain structures. Gene Expr Patterns (2002):199-203
Links:MGI:3714379 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE