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EMAGE:4553

Mgrn1 mahogunin, ring finger 1 ( MGI:2447670)
TS14 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4553
Fig4J. Copyright: This image is from [doi:10.1002/dvdy.20992] Cota CD; Bagher P; Pelc P; Smith CO; Bodner CR; Gunn TM, "Mice with mutations in Mahogunin ring finger-1 (Mgrn1) exhibit abnormal patterning of the left-right axis." Dev Dyn 2006 Dec;235(12):3438-47, and is displayed with the permission of Wiley-Blackwell who owns the Copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4553Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4553_wholemount_moderate.wlz
4553_wholemount_weak.wlz
4553_wholemount_possible.wlz
4553_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4553_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
homogeneousAt this stage the gene is broadly expressed, "virtually ubiquitous".
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Mgrn1 probeA
Entity Detected:Mgrn1, mahogunin, ring finger 1 ( MGI:2447670)
Sequence:sense strand is shown

>Mgrn1 probeA
CAGTTCCCCCGCACAGGTCCTGCTTCACTCACATCCTCACCCGCTGCCAAGGTGGCGGTTTGTGCTTGCA
GGGCAGCACTGCCCACCACCTGCCAGGGAGGAGCCTGAGCAGCTTCCATAGCAGATCCGTTGCCAGTTAC
CTGGCCTGTAAGCTTCTTACTGATTGATTGTCTAAGGCTCCTGTCAGAGCCCACCTAGAAGCAGGCTCCT
AGTGATACTTTGTTTCCAAGGCAGAAGTGGCCCATGAGTGGCCCCAGAGCAGAGGTGCCCCAGGCAGTGC
AGCTCCCTGGTGGGTTGGTAGAGGGACCTCAGCTTAAGGAACTGCCCTGCCACTCACCCAGGTGACAGCC
TGTAGCAGTGCATGGAGACCCCTTTAGGCTCAGGGCTGCTCGAGCTCTGACTCTAACCCTGCTCCTTCCT
nt 2452 - nt 2871 of NM_029657.3
Notes:The Mgrn1 probe used in this study by Cota et al., 2006 [PMID:17075880] "was a 420-bp portion of the 3' untranslated region (common to all four isoforms) generated by polymerase chain reaction using forward primer CAGTTCCCCCGCACAGGTC and reverse primer AGGAAGGAGCAGGGTTAGAGTCAG and IMAGE cDNA clone 3481878 as template".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Cota CD; Bagher P; Pelc P; Smith CO; Bodner CR; Gunn TM. 2006. [PMID:17075880] . Indexed and spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.20992] [ PMID:17075880] Cota CD, Bagher P, Pelc P, Smith CO, Bodner CR, Gunn TM 2006 Mice with mutations in Mahogunin ring finger-1 (Mgrn1) exhibit abnormal patterning of the left-right axis. Dev Dyn (235):3438-47
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE