EMAGE mouse gene expression spatial database

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EMAGE:4556

Mif macrophage migration inhibitory factor ( MGI:96982)
TS16 (10.5 dpc)
in situ hybridisation

Data Images


Fig 1e Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00057-X] Mech Dev 84: 153-6, Kobayashi S; Satomura K; Levsky JM; Sreenath T; Wistow GJ; Semba I; Shum L; Slavkin HC; Kulkarni AB, Expression pattern of macrophage migration inhibitory factor during embryogenesis. Copyright 1999	Fig 1f Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00057-X] Mech Dev 84: 153-6, Kobayashi S; Satomura K; Levsky JM; Sreenath T; Wistow GJ; Semba I; Shum L; Slavkin HC; Kulkarni AB, Expression pattern of macrophage migration inhibitory factor during embryogenesis. Copyright 1999	Fig 1h Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00057-X] Mech Dev 84: 153-6, Kobayashi S; Satomura K; Levsky JM; Sreenath T; Wistow GJ; Semba I; Shum L; Slavkin HC; Kulkarni AB, Expression pattern of macrophage migration inhibitory factor during embryogenesis. Copyright 1999

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Notes:

Fig1e shows a lateral view and Fig1f shows a dorsal view of a sample hybridised with anti-sense probe. Fig1h shows a lateral view of a sample hybridised with sense probe. Image annotations: (1) first branchial arch, (1a) maxillar component of first branchial arch, (1b) mandibular component of first branchial arch, (2) second branchial arch, (3) third branchial arch, (C) cranial ganglion, (F) forebrain, (Fl) forelimb bud, (Fp) frontal prominence, (H) hindbrain, (M) midbrain, (N) neural tube, (Np) nasal prominence, (Op) optic vesicle, (Ot) otic vesicle, (So) somite.

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4556_wholemount_moderate.wlz

4556_wholemount_weak.wlz

4556_wholemount_possible.wlz

4556_wholemount_notDetected.wlz

4556_wholemount_strong.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4556_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

cranial ganglion

detected

neural tube

detected

limb

detected

trunk somite

detected

tail somite

detected

branchial arch

detected

cervical vertebral pre-cartilage condensation

detected

thoracic vertebral pre-cartilage condensation

detected

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	Mif probeA
Entity Detected:	Mif, macrophage migration inhibitory factor ( MGI:96982)
Notes:	The Mif probe used in this study by Kobayashi et al., 1999 [PMID:10473131] is not described by the authors.
Chemistry:	RNA
Strand:	antisense

Specimen

Organism:	mouse
Age:	10.5 dpc
Theiler Stage:	TS16
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

General Information

Authors:	Kobayashi S; Satomura K; Levsky JM; Sreenath T; Wistow GJ; Semba I; Shum L; Slavkin HC; Kulkarni AB. 1999 [PMID:10473131] . Indexed and spatially mapped by EMAGE
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/S0925-4773(99)00057-X] [ PMID:10473131] Kobayashi S, Satomura K, Levsky JM, Sreenath T, Wistow GJ, Semba I, Shum L, Slavkin HC, Kulkarni AB 1999 Expression pattern of macrophage migration inhibitory factor during embryogenesis. Mech Dev (84):153-6
Links:	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source