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EMAGE:4562

Mrpl40 mitochondrial ribosomal protein L40 ( MGI:1332635)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4562
Fig3B. [doi:10.1006/geno.1998.5488] Funke B; Puech A; Saint-Jore B; Pandita R; Skoultchi A; Morrow B. 1998. Isolation and characterization of a human gene containing a nuclear localization signal from the critical region for velo-cardio-facial syndrome on 22q11. Genomics. 53(2):146-54.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4562Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4562_wholemount_moderate.wlz
4562_wholemount_weak.wlz
4562_wholemount_possible.wlz
4562_wholemount_notDetected.wlz
4562_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4562_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
fronto-nasal process
detected detected
1st branchial arch
detected detected
2nd branchial arch
detected detected
neural tube
detected detected
future forebrain
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:421339
Entity Detected:Mrpl40, mitochondrial ribosomal protein L40 ( MGI:1332635)
Sequence:sense strand is shown

>MGI:421339
CCCAGACCCGCGAGTTCCGGGCCGAGGCCTGCCAGACCCGACCGGGTACCTCAGGTCGGACCGCCCAGGG
GCGTGCTCCCGGAAGCTGCCCGCCAGCGGGTGGCGTGAAAAACTATGGCTACCGGGGTGATGCTGTGTGC
TGCGCGGGCTCTGCGGCCTCGGAGCTGGATCCCTGGAACCTGCCAGGCACACGTCAGACACACCCACCAG
AGAGCTTCCTTACTGGCCTTCTGGGATCTCATCCCCATGAGAGCAGAACCTCTGCGGAAGAAGAAGAAGG
TAGACCCCAGAAAGGATCAAGCAGCAAAGGATCGCTTGAAAAAGAGGATCCGAAAACTGGAAAAAGCCTC
CCAAGAACTGATTCCTATTGAAGATTTTATTACCCCTGTGAGGTTCTTGGATAAATCAAGACAGCGACCT
CAGGAGGAGCATTCACCTGAGGAGAGTGAACGGAGAGCTCTTCTGCTGAAGAGGTGGGCACTGTTTAAGC
AGCAGGAGCATGAGATGGAGAGGGACGCCATCAGATCCATGCTAGAAGCCCAGCAGGAAGCCCTGGAGGA
GCTGAAACTTGAATCTGCAGAGCTCTATGCCGAGGCCATAAAGCGGGATACCAGCCTATTCCCCTTCGAG
AAAGAAGGGCCACATTACACACCACCTATCTCTAACTACCAGGCCCCTGAAGGCAGGTACAATGATATCA
CCAAGGTGTACAAACAAGTAGAATTCAAAAGATAAGAGACTGAAAACTGCTGTCCTGGGAACATGCTGGC
CCTAGGAGTCTGGAGTAGAGATCTAAAGTCTACTTTCCACAGACAAGTGAGTCATCCTAGGAACAAATAA
AGGGTAATCAAGAGTAAAAAAAAAAAAAAAAAAA
nt 1 - nt 874 of AF034092.1
Notes:The Mrpl40 (Nlvcf) probe used in this study by Funke et al, 1998 [PMID:9790763] was "synthesized with T3 RNA polymerase with the mouse cDNA clone AA237833 as template".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6J
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Funke B; Puech A; Saint-Jore B; Pandita R; Skoultchi A; Morrow B, 1998 [PMID:9790763] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1006/geno.1998.5488] [ PMID:9790763] Funke B, Puech A, Saint-Jore B, Pandita R, Skoultchi A, Morrow B 1998 Isolation and characterization of a human gene containing a nuclear localization signal from the critical region for velo-cardio-facial syndrome on 22q11. Genomics (53):146-54
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE