Type: | in situ hybridisation probe |
Identifier: | MGI:17162 |
Entity Detected: | Hoxd1, homeobox D1 ( MGI:96201) |
Sequence: | sense strand is shown
>MGI:17162
AAGCTTCCCCGGTCAGAAACAAGTCCCATCAAATCTGGCCGGAATCTAGGAAGCCCTTCTCAGGCTCAAG
AGCCTTCCTGAGGCCCACTCTTAAGGCTGAGGACCTTGGGTCTACAGAAGTCACAGACTGCTCCCCACCT
TTGAATAGACTTGAGAGCTTAGTTTGGGCTGGAGGTGGGCATGGGTAGAAATTAATACGGATTTTACTTG
GCAAAGGAATTGTCTAAATTGGCTTCTGAGTTCCAGAGGCTGTGTATAGAGATATATATTTCGATATCTT
TTATTCGCATATTATTTTTAGCCTCATGGGGAGGAAAGGTGTCTTAGCTACCTGCCTAAACGCTGCTATG
TGAGCCACTTAAAATTCTCGGGTGCAGAGTGGCAGGCCTTCTTAGTCTAGTGTGGTCAGAAACGTATCTC
TCTGAAGTTGTTTCAGTTTTAATTTCCTGGACAGACTACATATATTCAGCTTCCTGAGATGATCAAAGCT
AGCTAGGGTTTCCTCTATGTAGCTAAGCTGCTTCAATGATGATCTTCATATTGTGCTCCAGTTTGTTTAT
TTAAAGTGCGCTCCTACCTCTTCGTGTGCCTGGGTGAAGAAACACAATCACTGTTTAGTTAGTAGCGGAA
CAAATCCACAGGGTAGGTAAGGATTAGAATCTGAATTATACCTTGGCATCAGTTACTCAAACTTGAAGTG
TAAATATATACAGTATGTATATTTTTTAAAGATTTGCTTGCAGTGAACCTTATATATGCAATTTAATGTC
ATGCAATGTAAAGATTTTGACTTTTTTTTTTTTTTTTTGGTAATAAAAGTTACAGAATCTAC
|
| nt 1026 - nt 1857 of X60034.1 |
Notes: | The Hoxd1 probe used in this study by Peichel et al., 1997 [PMID:9342041] is indicated as that originally described by Frohman & Martin, 1992 [PMID:1356009] i.e. "an 831 bp Hox-4.9 HindIII-SalI fragment (probe 1, Fig. 2A)".
Editors Note: In Fig 2A of Frohman & Martin, the probe is shown extending from a HindIII site to the 3' end of the transcript. There are no SalI sites in the Hoxd1 cDNA sequence, therefore the SalI site mentioned is presumed to be linker derived. |
Chemistry: | RNA |
Strand: | antisense |
Label: | digoxigenin |