Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4675

Bhlhe40 basic helix-loop-helix family, member e40 ( MGI:1097714)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4675
Fig1E. from [doi:10.1074/jbc.M108578200] J Biol Chem 277(8): 6637-44, Pfisterer P; Ehlermann J; Hegen M; Schorle H, A subtractive gene expression screen suggests a role of transcription factor AP-2 alpha in control of proliferation and differentiation. Copyright 2002

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4675Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4675_wholemount_moderate.wlz
4675_wholemount_notDetected.wlz
4675_wholemount_strong.wlz
4675_wholemount_possible.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4675_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
rhombomere 05
detected detected
tail
detected detected
regionalStra13 RNA was detected in tip of the tail
trunk mesenchyme
detected detected
regionalStra13 RNA is detected in the mesenchyme surrounding the dorsal aorta.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Bhlhb2 probeA
Entity Detected:Bhlhe40, basic helix-loop-helix family, member e40 ( MGI:1097714)
Notes:The Bhlhb2 (Stra13) probe used in this study by Pfisterer et al., 2002 [PMID:11741941] is one of a number of probes used that are collectively described as being "generated using recombinant clones containing full-length cDNAs with T7 and SP6 RNA polymerase."
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Pfisterer P; Ehlermann J; Hegen M; Schorle H, 2002 [PMID:11741941] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1074/jbc.M108578200] [ PMID:11741941] Pfisterer P, Ehlermann J, Hegen M, Schorle H 2002 A subtractive gene expression screen suggests a role of transcription factor AP-2 alpha in control of proliferation and differentiation. J Biol Chem (277):6637-44
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE