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EMAGE:4761

Pax8 paired box gene 8 ( MGI:97492)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4761
Fig7J-a. [doi:10.1093/emboj/20.16.4454] Hirata H; Tomita K; Bessho Y; Kageyama R, EMBO J (2001) 20: 4454-66. "Hes1 and Hes3 regulate maintenance of the isthmic organizer and development of the mid/hindbrain." [PMID:11500373] © Nature Publishing Group. Reproduced with permission from EMBO J.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4761Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4761_wholemount__moderate.wlz
4761_wholemount__possible.wlz
4761_wholemount__notDetected.wlz
4761_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4761_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
hindbrain
detected detected
regionalExpressed in isthmic organiser.
midbrain
detected detected
regionalExpressed in isthmic organiser.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Pax8 probeA
Entity Detected:Pax8, paired box gene 8 ( MGI:97492)
Notes:The Pax8 probe used in this study by Hirata et al., 2001 [PMID:11500373] is described as encompassing nucleotide residues "91-2393". Editors note: The authors do not refer these co-ordinates to a particular sequence, the exact region covered is unclear.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Hirata H; Tomita K; Bessho Y; Kageyama R, 2001 [PMID:11500373] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1093/emboj/20.16.4454] [ PMID:11500373] Hirata H, Tomita K, Bessho Y, Kageyama R 2001 Hes1 and Hes3 regulate maintenance of the isthmic organizer and development of the mid/hindbrain. EMBO J (20):4454-66
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE