Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:4802

Cdh1 cadherin 1 ( MGI:88354)
TS15 (9.5 dpc)
in situ reporter

Data Images
EMAGE:4802
Fig3D. Copyright: This image is from Stemmler MP; Hecht A; Kemler R, Development 2005;132(5):965-76 [doi:10.1242/dev.01662] and is displayed with the permission of The Company of Biologist Limited who owns the Copyright. [PMID:15673570]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4802Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4802_wholemount_possible.wlz
4802_wholemount_notDetected.wlz
4802_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4802_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
gut
strong strong
regionalIntense beta-gal expression was observed in the definitive gut endoderm between E8.5 and E10.5.
surface ectoderm
detected detected
extraembryonic component
detected detected
regionalFrom E8.5 onwards, expression in the yolk sac was detected, and this increased until E10.5.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ reporter
Entity Detected:Cdh1, cadherin 1 ( MGI:88354)
Notes:Cdh1 (E-cadherin) expression was detected in this study by Stemmler et al., 2005 [PMID:15673570] using a gene targeted strategy. A targeting vector was designed to insert a Betageo cassette into the ATG codon a loxP site at the 5' end of exon 2. A second targeting vector inserted a PGK-hygromycin cassette flanked by FRT sites and a single loxP site at the 3' end of intron 2, thereby flanking intron 2 with loxP sites (the generated allele is called Ecad-In2floxFRT (MGI:3574476)). Mice carrying the Ecad-In2floxFRT allele were then crossed with Flpe expressing mice to delete the hygromycin cassette. Exon 2 remained flanked by loxP sites. The resultant allele is called Ecad-In2flox (MGI:3574479). For a full description of the strategy, see figure 1 in paper. The authors also state that the Ecad-In2flox reporter lines reflects the endogenous E-cadherin expression pattern.
Labelled with:LacZ
Specimen
Organism:mouse
Strain:involves: 129P2/OlaHsd * C57BL/6
Age:9.5 dpc
Theiler Stage:TS15
Mutations:Cdh1tm3.1Kem/Cdh1+
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Stemmler MP; Hecht A; Kemler R, 2005 [PMID:15673570] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1242/dev.01662] [ PMID:15673570] Stemmler MP, Hecht A, Kemler R 2005 E-cadherin intron 2 contains cis-regulatory elements essential for gene expression. Development (132):965-76
Links:MGI:3574479 allele description
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE