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EMAGE:4835

Cebpb CCAAT/enhancer binding protein (C/EBP), beta ( MGI:88373)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4835
Fig1B. from [doi:10.1387/ijdb.062146aw] Int J Dev Biol 50(7): 653-7, Westmacott A; Burke ZD; Oliver G; Slack JM; Tosh D, C/EBPalpha and C/EBPbeta are markers of early liver development. Copyright 2006 [PMID:16892179]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4835Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4835_wholemount_possible_3D_1.wlz
4835_wholemount_notDetected_3D_1.wlz
4835_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4835_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
biliary bud
detected detected
The only location for expression at this stage is the early liver bud.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Cebpb probeA
Entity Detected:Cebpb, CCAAT/enhancer binding protein (C/EBP), beta ( MGI:88373)
Sequence:sense strand is shown

>Cebpb probeA
GCCCGTTGCCAGGCGCCGCCTTATAAACCTCCCGCTCGGCCGCCGCCGCGCCGAGTCCGAGCCGCGCACG
GGACCGGGACGCAGCGGAGCCCGCGGGCCCCGCGTTCATGCACCGCCTGCTGGCCTGGGACGCAGCATGC
CTCCCGCCGCCGCCCGCCGCCTTTAGACCCATGGAAGTGGCCAACTTCTACTACGAGCCCGACTGCCTGG
CCTACGGGGCCAAGGCGGCCCGCGCCGCGCCGCGCGCCCCCGCCGCCGAGCCGGCCATTGGCGAGCACGA
GCGCGCCATCGACTTCAGCCCCTACCTGGAGCCGCTCGCGCCCGCCGCGGACTTCGCCGCGCCCGCGCCC
GCGCACCACGACTTCCTCTCCGACCTCTTCGCCGACGACTACGGCGCCAAGCCGAGCAAGAAGCCGGCCG
ACTACGGTTACGTGAGCCTCGGCCGCGCGGGCGCCAAGGCCGCGCCGCCCGCCTGCTTCCCGCCGCCGCC
TCCCGCCGCGCTCAAGGCGGAGCCGGGCTTCGAACCCGCGGACTGCAAGCGCGCGGACGACGCGCCCGCC
ATGGCGGCCGGTTTCCCGTTCGCCCTGCGCGCCTACCTGGGCTACCAGGCGACGCCGAGCGGCAGCAGCG
GCAGCCTGTCCACGTCGTCGTCGTCCAGCCCGCCCGGCACGCCGAGCCCCGCCGACGCCAAGGCCGCGCC
CGCCGCCTGCTTCGCGGGGCCGCCGGCCGCGCCCGCCAAGGCCAAGGCCAAGAAGACGGTGGACAAGCTG
AGCGACGAGTACAAGATGCGGCGCGAGCGCAACAACATCGCGGTGCGCAAGAGCCGCGACAAGGCCAAGA
TGCGCAACCTGGAGACGCAGCACAAGGTGCTGGAGCTGACGGCGGAGAACGAGCGGCTGCAGAAGAAGGT
GGAGCAGCTGTCGCGAGAGCTCAGCACCCTGCGGAACTTGTTCAAGCAGCTGCCCGAGCCGCTGCTGGCC
TCGGCGGGCCACTGCTAGCGCGGCGCGGGTGGCGTGGGGGGCGCCGCGGCCACCCTGGGCACCGTGCGCC
CTGCCCCGCGCGCTCCGGCCCCGCGCGCGCGCCCGGACCACCGTGCGTGCCCTGCGCGCACCTGCACCTG
CACCGAGGGGACACCGCGGGCACACCGCGGGCACCGCGCGCACGCACCTGCACAGCGCACCGGGTTTCGG
GACTTGATGCAATCCGGATCAAACGTGGCTGAGCGCGTGTGGACACGGGACTGACGCAACACACGTGTAA
CTGTCAGCCGGGCCCTGAGTAATCACTTAAAGATGTTCCTGCGGGGTTGTTGATGTTTTTGGTTTTGTTT
TTGTTTTTTGTTTTGTTTTGTTTTTTTTTTTGGTCTTATTATTTTTTTTGTATTATATAAAAAAGTTCTA
TTTCTATGAGAAAAGAGGCGTATGTATATTTTGAGAACCTTTTCCGTTTCGAGCATTAAAGTGAAGACAT
TTTAATAAACTTTTTTGGAGAATGTTTAAAAGCCAAA
nt 1 - nt 1507 of NM_009883.3
Notes:The Cebpb (C/EBP beta) probe used in this study by Westmacott et al., 2006 [PMID:16892179] is described as "1500bp and represented the full length cDNA sequence." Editors note: due to the similarity in length, it is assumed that the entire length of the RefSeq cDNA sequence NM_009883.3 equates to the sequence referred to by the authors.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Westmacott A; Burke ZD; Oliver G; Slack JM; Tosh D, 2006 [PMID:16892179] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1387/ijdb.062146aw] [ PMID:16892179] Westmacott A, Burke ZD, Oliver G, Slack JM, Tosh D 2006 C/EBPalpha and C/EBPbeta are markers of early liver development. Int J Dev Biol (50):653-7
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE