EMAGE mouse gene expression spatial database

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EMAGE:4836

Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila) ( MGI:1100883)
TS15 (9.5 dpc)
in situ hybridisation

Data Images


Fig1E. Copyright: This image is from [doi:10.1002/dvdy.10054] Shima Y; Copeland NG; Gilbert DJ; Jenkins NA; Chisaka O; Takeichi M; Uemura T , "Differential expression of the seven-pass transmembrane cadherin genes Celsr1-3 and distribution of the Celsr2 protein during mouse development." Dev Dyn 2002 Mar;223(3):321-32. Reprinted with permission of Wiley-Liss Inc. [PMID:11891983] .

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4836_wholemount_moderate_3D_1.wlz

4836_wholemount_notDetected_3D_1.wlz

4836_wholemount_strong_3D_1.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4836_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

nervous system

detected

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	Celsr1 probeA
Entity Detected:	Celsr1, cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila) ( MGI:1100883)
Sequence:	sense strand is shown >Celsr1 probeA TTTGCTGGGCCTGTCGGAACGGTTATAATCATCAACACGGTCATCTTTGTCCTGTCTGCAAAGGTTTCCT GCCAAAGAAAGCACCATTATTATGAAAGAAAGGGGGTTGTCTCCATGCTGAGGACGGCCTTCCTCCTGCT GCTGCTCGTCACTGCCACCTGGCTGCTGGGACTGCTGGCGGTCAACAGTGACACTCTGAGCTTTCACTAC CTCTTTGCTGCCTTCAGCTGCTTGCAGGGCATCTTTGTCCTCCTGTTCCACTGCGTGGCCCACAGGGAGG TGCGGAAGCACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAGCTGGATGACTCGGCCACCACTCGGGC CACTCTGCTAACGCGCTCCCTCAACTGCAACAACACCTACAGCGAAGGGCCAGACATGCTCCGCACCGCC CTGGGCGAGTCCACAGCCTCTCTGGACAGTACCACCAGGGATGAAGGGGTCCAGAAACTCAGTGTGTCCT CTGGCCCAGCCCGTGGTAACCATGGAGAACCAGATACATCCTTCATCCCTAGGAACTCCAAAAAAGCTCA CGGCCCTGACTCTGACTCTGACAGTGAGCTGTCCCTGGACGAGCACAGTAGTTCCTACGCCTCTTCACAC ACATCGGACAGCGAGGATGATGGCGGAGAGGCTGAAGACAAATGGAATCCGGCTGGGGGCCCCGCCCATA GCACCCCAAAAGCAGATGCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGACGAGAGCCTGGCTGGGAG TGACAGTGAGGAGTTGGACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACACCGG CAGGCGCAGGGCAATCACTGTGGCGACCGGCCCTCCGACCCGGAAAGTGGGGTCCTGGCCAAGCCAGTGG CCGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGGCATCCTGAAAAACAA
	nt 7895 - nt 8856 of NM_009886.1
Notes:	The Celsr1 probe used in this study by Shima et al., 2002 [PMID:11891983] is described as "nt 7895-8856 of NM_009886." Editors note: at the time of publication of this paper, only one version of NM_009886 (NM_009886.1) existed. NM_009886.2 was released in 2006.
Chemistry:	RNA
Strand:	antisense

Specimen

Organism:	mouse
Age:	9.5 dpc
Theiler Stage:	TS15
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

Fixation:

4% paraformaldehyde

General Information

Authors:	Shima Y; Copeland NG; Gilbert DJ; Jenkins NA; Chisaka O; Takeichi M; Uemura T, 2002 [PMID:11891983] , Indexed and Spatially Mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1002/dvdy.10054] [ PMID:11891983] Shima Y, Copeland NG, Gilbert DJ, Jenkins NA, Chisaka O, Takeichi M, Uemura T 2002 Differential expression of the seven-pass transmembrane cadherin genes Celsr1-3 and distribution of the Celsr2 protein during mouse development. Dev Dyn (223):321-32
Links:	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source