EMAGE mouse gene expression spatial database

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EMAGE:4915

Rcor2 REST corepressor 2 ( MGI:1859854)
TS19 (10 dpc)
in situ hybridisation

Data Images


Figure 4A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00477-4] Mech Dev 108:165-9, Tontsch S; Zach O; Bauer H, "Identification and localization of M-CoREST (1A13), a mouse homologue of the human transcriptional co-repressor CoREST, in the developing mouse CNS." Copyright 2001. [PMID:11578870]	Figure 4C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00477-4] Mech Dev 108:165-9, Tontsch S; Zach O; Bauer H, "Identification and localization of M-CoREST (1A13), a mouse homologue of the human transcriptional co-repressor CoREST, in the developing mouse CNS." Copyright 2001. [PMID:11578870]

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Notes:

Note: developing limbs (arrows). Boxed area in A is shown in C. Ha, hyoid arch; ma, mandibular arch; mp, maxillary process.

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4915_wholemount_moderate_3D_1.wlz

4915_wholemount_notDetected_3D_1.wlz

4915_wholemount_strong_3D_1.wlz

4915_wholemount_possible_3D_1.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4915_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

limb

strong

maxillary process

strong

Expressed in area of the prospective tooth anlage and is stronger in maxillary process.

mandibular process

detected

Expressed in area of the prospective tooth anlage and is stronger in maxillary process.

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	Rcor2 probeA
Entity Detected:	Rcor2, REST corepressor 2 ( MGI:1859854)
Sequence:	sense strand is shown >Rcor2 probeA GGCTCATGACAGCATGATCCGAGTTGGAACCAATTACCAAGCAGTAATTCCGGAGTGCAAGCCTGAGAGC CCTGCACGCTATAGCAACAAGGAGCTGAAGGGAATGCTGGTGTGGTCCCCCAACCACTGTGTATCAGATG CCAAACTTGACAAGTACATTGCAATGGCCAAGGAGAAGCATGGCTATAACATTGAGCAGGCACTCGGCAT GCTTCTGTGGCATAAACACGATGTGGAGAAATCACTGGCTGACCTAGCCAACTTCACTCCCTTCCCTGAT GAGTGGACGGTGGAGGACAAGGTGCTGTTTGAACAGGCCTTTGGGTTCCATGGCAAGTGCTTCCAGCGGA TCCAGCAGATGCTCCCTGACAAGGTGATTCCCAGCCTGGTGAAGTATTACTACTCTTGGAAGAAGACCCG AAGTCGAACTAGTGTGATGGACAGGCAGGCCAGGCGGCTGGGTGGCCGCAAGGACAAAGAAGACAGTGAT GAACTAGAAGAGGGACGAGGAGCTGTGAGTGAGGGGGAACCGGATACTGGAGACCCCAAGCGAGAGCCTC TGCCATCCAGACCTCTGAATGCACGGCCTGGTCCTGGGAAGAAGGAGGTTCAGATATCTCAGTATCGCCA CCACCCACTTCGAACTCGGAGACGTCCGCCCAAGGGCATGTACCTGAGTCCTGAAGGCCTCACTGCAGTA TCGGGAAGCCCAGACCTCGCTAACCTCACACTCCGAGGTCTTGACTCACAGCTCATCTCTCTTAAGCGCC AGGTCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGCATTGACCCTCTCCG CCCCCCTGAGGCTAATACCAAGTTCAACTCCCGCTGGACCACTGATGAGCAACTTCTAGCTGTTCAAGCT ATTCGTAGATACGGCAAAGACTTTGGGGCTATTGCAGAGGTGATTGGGAACAAGACTCTGACCCAAGTGA AGACCTTCTTTGTGAGCTATCGTCGCCGCTTCAACCTGGAAGAGGTGCTGCAGGAATGGGAGGCTGAGCA GGATGGGGCCCCCGCAGCTCCGGTCCCCACGGAAGAGGCCAGGCGAGGGGCTCCTGTACCAGCCACAGCC CTAGAAGAAGATGATGAGGTCCAGATTACATCTGTCTCAACATCAGTACCCCGATCAGTACCCCCTGCAC CGCCCCCACCTCCACCGCCCACCTCGCTTTCCCAGCCACCCCCGCTGCTGAGGCCACCTCTGCCCACAGC TCCCACATTGCTCCGCCAGCCGCCTCCCCTGCAGCAGGGCCGCTTCCTGCAGCCTCGGCTGGCCCCCAAC CAGCCTCCACCACCGCTCATCCGCCCTGCCCTGGCTGCCTCTCGCCACAGTGCCCGCCCTGGTCCTCAGC CTCCACCTACCCTGGTTGGAGCTCCTTTGGAGCCCCCTGCACCCTCACTTTGAGCCTGAATCCTCCATTG CCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAGGGCTCT TGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCC TGGCAGCTGAGCTTGTAAACCCCCAGCCAGGGGCTAGATCTCAGGGCCTGCAGGGACTCTTGCTTCCTGG CTGTGACTGGAATGGCTGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT GTGGGGGTAATGACTTTAGCCTGGGGGATGGGGGAGAGGACAGGATGTTAGCTGGCCTCATTCACCTTTC CTTCTTTTTAGCAATAAGTCAGGTGCAGTGGAAGGGGATTGGGGTGGGGATGGCAGAAATCTGGTGGGAA GAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGA CTTACACAGACATGGGTTTATTTTTCAACATTTTTAAAAAATAAATGCAACCTTGAATGTAAAAAAAAAA AAAAAAA
	nt 1 - nt 2037 of X83587.2
Notes:	The Rcor2 (CoREST) probe used in this study by Tontsch et al., 2001 [PMID:11578870] "was transcribed from the entire M-CoREST cDNA clone". Editors Note: One of the authors of this paper, Bauer, submitted a murine CoREST cDNA clone sequence encompassing the whole ORF and 3'UTR as well as 14nt of 5'UTR sequence (X83587.2) to GenBank. It is assumed that this is the "entire M-CoREST cDNA clone" referred to by the authors.
Chemistry:	RNA
Strand:	antisense

Specimen

Organism:	mouse
Strain:	NMRI
Age:	10 dpc
Theiler Stage:	TS19
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

Fixation:

4% paraformaldehyde

General Information

Authors:	Tontsch S; Zach O; Bauer H, 2001 [PMID:11578870] . Indexed and spatially mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/S0925-4773(01)00477-4] [ PMID:11578870] Tontsch S, Zach O, Bauer HC 2001 Identification and localization of M-CoREST (1A13), a mouse homologue of the human transcriptional co-repressor CoREST, in the developing mouse CNS. Mech Dev (108):165-9
Links:	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source