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EMAGE:4979

Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 ( MGI:102670)
TS15 (9.5 dpc)
immunohistochemistry

Data Images
EMAGE:4979
Fig1C Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(00)00283-5] Mech Dev 93: 139-49, Toyooka Y; Tsunekawa N; Takahashi Y; Matsui Y; Satoh M; Noce T , Expression and intracellular localization of mouse Vasa-homologue protein during germ cell development. Copyright 2000. [PMID:10781947]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4979Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4979_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4979_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
embryo
not detected not detected
homogeneousno MVH-positive cells were observed until ~10.5dpc.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:antibody
Identifier:Ddx4 antibodyA
Entity Detected:Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 ( MGI:102670)
Antigen:sense strand is shown

>Ddx4 antibodyA
MGDEDWEAEILKPHVSSYVPVFEKDKYSSGANGDTFNRTSASSDIGESSKKENTSTTGGFGRGKGFGNRG
FLNNKFEEGDSSGFWKESNNDCEDNQTRSRGFSKRGGCQDGNDSEASGPFRRGGRGSFRGCRGGFGLGRP
NSESDQDQGTQRGGGLFGSRKPAASDSGNGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSETEGGESS
DSQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAG
YTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTREL
INQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDE
ADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQ
TILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFR
CGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLV
KVLSDAQQDVPAWLEEIAFSTYVPPSFSSSTRGGAVFASVDTRKNYQGKHTLNTAGISSSQAPNPVDDES
aa 1 - aa 700 of NP_034159.1
Notes:The anti-DDX4 (MVH) antibody used in this study by Toyooka et al., 2000 [PMID:10781947] was produced as described here: "A full-length Mvh cDNA fragment appended BamHI and SalI sites at the 5' and 3' ends, respectively, and was generated by PCR amplification using mouse testis cDNAs as templates (primers, 5'-ggatccGAACCTGAAGCTATCATGGGA-3' and 5'-gtcgacCCATGA TTCGTCATCAACTGG-3'). The cDNA fragment (2.1 kb) was subcloned in frame into the BamHI/SalI site of the glutathione S-transferase (GST)-tagged expression vector pGEX-4T-1 (Pharmacia). The GST-MVH fusion protein produced in Escherichia coli was purified using a GST gene fusion system (Pharmacia) according to the manufacturer's instructions and was concentrated using a centrifugal concentrator (Centriplus, Amicon) to a final concentration of 0.3 mg/ml. Approximately 300 ug of purified protein was emulsified in Freund's complete adjuvant (DIFCO), and injected subcutaneously into a rabbit four times at 2-week intervals. The antiserum was purified by affinity chromatography using agarose-gel beads coupled with GST-MVH fusion protein and the resulting solution of purified antibodies (0.43 mg protein/ml) was used as an original solution of anti-MVH antibody." Editors Note: the PCR amplified region used to generate the antigen covers nt 27-2144 of the mouse Ddx4 cDNA RefSeq NM_010029.1 (CDS 42..2150) - i.e. all but the last two amino acids.
Antibody Type:polyclonal
Raised In:rabbit
Specimen
Organism:mouse
Strain:ICR/Slc
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:Bouin's fixation
Secondary Antibody:goat anti-rabbit IgG
Labelled with:alkaline phosphatase
Visualisation method:NBT+BCIP
General Information
Authors:Toyooka Y; Tsunekawa N; Takahashi Y; Matsui Y; Satoh M; Noce T, 2000 [PMID:10781947] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(00)00283-5] [ PMID:10781947] Toyooka Y, Tsunekawa N, Takahashi Y, Matsui Y, Satoh M, Noce T 2000 Expression and intracellular localization of mouse Vasa-homologue protein during germ cell development. Mech Dev (93):139-49
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE