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EMAGE:5

Hoxb13 homeobox B13 ( MGI:107730)
TS14 (9.0 dpc)
in situ hybridisation

Data Images
EMAGE:5
Fig 7b, Zeltser et al, 1996 [PMID:8756292] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5_wholemount_strong_3D_1.wlz
5_wholemount_moderate_3D_1.wlz
5_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
hindgut diverticulum
detected detected
regional
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1339597
Entity Detected:Hoxb13, homeobox B13 ( MGI:107730)
Sequence:sense strand is shown

>MGI:1339597
ATGGAGCCCGGCAATTATGCCACCTTGGACGGGGCCAAGGATATCGAAGGCTTGCTGGGAGCTGGAGGGG
GTCGGAATCTAGTCTCCCACTCCTCCCCACTGGCTAGCCATCCCGCGGCTCCAACGCTGATGCCAACTGT
CAACTATGCCCCCCTGGATCTGCCAGGCTCTGCAGAGCCACCAAAGCAGTGCCACCCTTGTCCTGGGGTG
CCTCAGGGGGCATCTCCAGCTCCTGTGCCTTATGGCTACTTTGGAGGCGGGTACTACTCTTGCCGAGTAT
CCAGGAGCTCCCTGAAACCCTGTGCCCAGACGGCCGCCCTGGCTACCTACCCTTCGGAAACTCCTGCACC
TGGGGAGGAGTATCCCAGCCGTCCCACCGAGTTTGCCTTCTATCCGGGCTACCCGGGACCATACCAGCCT
ATGGCCAGTTACCTGGATGTGTCTGTGGTGCAGACCCTGGGAGCCCCCGGAGAGCCTCGCCACGATTCTC
TGCTTCCCGTGGACAGTTACCAGCCCTGGGCCCTGGCCGGTGGCTGGAACAGCCAGATGTGTTGCCAAGG
TGAACAGAACCCACCAGGTCCATTCTGGAAAGCAGCGTTTGCAGAGCCCAGTGTCCAGCACCCTCCTCCC
GACGGCTGTGCCTTCCGCCGAGGCCGCAAAAAACGCATTCCCTATAGCAAGGGGCAGTTGCGGGAGTTGG
AGCGGGAGTATGCAGCCAACAAGTTTATCACTAAGGACAAGAGGCGCAAGATCTCGGCAGCCACCAGCCT
CTCTGAACGCCAGATTACCATCTGGTTTCAGAACCGCCGGGTCAAGGAGAAGAAGGTTCTTGCCAAGGTC
AAGACCAGCACTACCCCGTGA
Notes:The probe is described by Zeltser et al., 1996 [PMID:8756292] as a "398bp BglII/XbaI fragment that extends from K-33 of the homeobox through the 3' untranslated region". The most 5' 121bp of this probe extends between nt 748 (BglII) and nt 861 (stop codon) of U57051.1 (Note that U57051.1 contains only the coding region).
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.0 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Zeltser et al, 1996 [PMID:8756292] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:8756292] Zeltser L, Desplan C, Heintz N 1996 Hoxb-13: a new Hox gene in a distant region of the HOXB cluster maintains colinearity. Development (122):2475-84
Links:MGI:1341622 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE