Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:505

Zeb1 zinc finger E-box binding homeobox 1 ( MGI:1344313)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:505 EMAGE:505 EMAGE:505
Figure 2B of Takagi et al., 1998 [PMID:9389660] Copyright: This image is from Development and is displayed with the permission of The Company of Biologists Ltd. who owns the copyright. Figure 2C of Takagi et al., 1998 [PMID:9389660] Copyright: This image is from Development and is displayed with the permission of The Company of Biologists Ltd. who owns the copyright. Figure 2D of Takagi et al., 1998 [PMID:9389660] Copyright: This image is from Development and is displayed with the permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Figures C and D have not been spatially mapped in this entry but show dorsal aspects of the hindlimb and forelimb buds of the embryo in B. Abbreviations used: cg, cranial ganglia; fl, forelimb bud; hl, hindlimb bud; nc, neural crest. A and P indicate the direction of anterior-posterior axis. Asterisk in B indicates non-specific signals produced by probes trapped in the brain ventricles and observed with sense probes (data not shown).
Expression Pattern Description
Spatial Annotation:
EMAGE:505Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
505_wholemount_strong_3D_1.wlz
505_wholemount_moderate_3D_1.wlz
505_wholemount_weak_3D_1.wlz
505_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:505_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
branchial arch
detected detected
hindlimb ridge
strong strong
homogeneous
cranial preganglion
detected detected
trunk somite
moderate moderate
homogeneous
tail paraxial mesenchyme
moderate moderate
homogeneous
forelimb bud
strong strong
regionalExpression was confined to the posterior portion and included the region of the Hoxd-13 expression
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1197090
Entity Detected:Zeb1, zinc finger E-box binding homeobox 1 ( MGI:1344313)
Sequence:sense strand is shown

>MGI:1197090
GTCGACAGTCAGTAGCGTTTACCAGAACAGTGTTTATTCTGTCCAGGAAGAACCCTTGAACTTGTCTTGT
GCAAAAAAGGAACCACAAAAGGACAGCTGTGTTACAGACTCAGAACCAGTTGTAAATGTAGTCCCACCAA
GTGCCAACCCCATAAACATTGCTATTCCTACAGTCACTGCCCAGTTACCCACAATCGTGGCCATTGCTGA
CCAGAACAGTGTTCCATGTTTAAGAGCACTGGCCGCCAACAAGCAGACTATTCTGATTCCCCAAGTGGCA
TATACATATTCAGCTACTGTGAGCCCTGCCGTGCAGGAGCCGCCAGTGAAGGTGATCCAGCCAAACGGAA
ACCAGGATGAAAGACAAGACACTAGCTCAGAAGGAGTCTCCACTGTGGAGGACCAGAATGACTCTGACTC
CACGCCACCCAAAAAGAAAACTCGGAAGACAGAGAATGGAATGTATGCATGTGACCTGTGTGACAAGATA
TTTCAGAAGAGCAGCTCACTGTTGAGACACAAATATGAGCACACAGGTAAGAGGCCTCACGAGTGTGGAA
TCTGTAGAAAGGCATTTAAACACAAGCATCATTTGATTGAGCACATGCGGCTGCACTCTGGGGAAAAGCC
CTATCAATGTGACAAGTGTGGCAAGCGCTTCTCACACTCCGGCTCCTACTCTCAACACATGAATCACCGC
TACTCCTACTGCAAGAGAGGAGCTGAAGACAGAGATGCTATGGAGCAGGAAGACGCTGGGCC
nt 2200 - nt 2961 of NM_011546.1
Notes:The Zfhx1a (deltaEF1) probe used in this study by Takagi et al., 1998 [PMID:9389660] is described as a "0.8kb SalI-ApaI cDNA fragment".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Takagi et al., 1998 [PMID:9389660] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9389660] Takagi T, Moribe H, Kondoh H, Higashi Y 1998 DeltaEF1, a zinc finger and homeodomain transcription factor, is required for skeleton patterning in multiple lineages. Development (125):21-31
Links:MGI:1306682 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI