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EMAGE:5056

Slitrk6 SLIT and NTRK-like family, member 6 ( MGI:2443198)
TS18 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5056 EMAGE:5056
Figure 1E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00141-8] Gene Expr Patterns 3: 727-33, Aruga J, "Slitrk6 expression profile in the mouse embryo and its relationship to that of Nlrr3." Copyright 2003. [PMID:14643680] Figure 1F. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00141-8] Gene Expr Patterns 3: 727-33, Aruga J, "Slitrk6 expression profile in the mouse embryo and its relationship to that of Nlrr3." Copyright 2003. [PMID:14643680]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: BA, branchial arch; FL, forelimb; HL, hindlimb; LE, trunk lateral epidermis.
Expression Pattern Description
Spatial Annotation:
EMAGE:5056Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5056_wholemount_moderate.wlz
5056_wholemount_notDetected.wlz
5056_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5056_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
regionalExpressed in lateral epidermis and into the proximal limb bud.
limb
detected detected
regionalExpressed proximally.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Slitrk6 probeA
Entity Detected:Slitrk6, SLIT and NTRK-like family, member 6 ( MGI:2443198)
Notes:The Slitrk6 probe used in this study by Aruga, 2003 [PMID:14643680] is indicated as that used by Aruga & Mikoshiba , 2003 [PMID:14550773] , which is of unreported sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:CD-1
Age:10.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Aruga J, 2003 [PMID:14643680] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00141-8] [ PMID:14643680] Aruga J 2003 Slitrk6 expression profile in the mouse embryo and its relationship to that of Nlrr3. Gene Expr Patterns (3):727-33
 [ doi:10.1016/S1044-7431(03)00129-5] [ PMID:14550773] Aruga J, Mikoshiba K 2003 Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth. Mol Cell Neurosci (24):117-29
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE