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EMAGE:5064

Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ( MGI:1914243)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5064
Fig1D. [doi:10.1038/nature03071] Lickert H; Takeuchi JK; Von Both I; Walls JR; McAuliffe F; Adamson SL; Henkelman RM; Wrana JL; Rossant J; Bruneau BG, "Baf60c is essential for function of BAF chromatin remodelling complexes in heart development." Nature 2004 Nov 4;432(7013):107-12. [PMID:15525990] © Nature Publishing Group. Reproduced with permission from Nature.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: h - heart, arrowheads - expression in somites.
Expression Pattern Description
Spatial Annotation:
EMAGE:5064Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5064_wholemount__notDetected.wlz
5064_wholemount__strong.wlz
5064_wholemount__moderate.wlz
5064_wholemount__weak.wlz
5064_wholemount__possible.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5064_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trunk somite
detected detected
regionalExpressed in myotomes.
heart
detected detected
forelimb bud mesenchyme
detected detected
neural tube
detected detected
Expressed dorsally.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Smarcd3 probeA
Entity Detected:Smarcd3, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ( MGI:1914243)
Notes:The Smarcd3 probe used in this study by Lickert et al., 2004 [PMID:15525990] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Lickert H; Takeuchi JK; Von Both I; Walls JR; McAuliffe F; Adamson SL; Henkelman RM; Wrana JL; Rossant J; Bruneau BG, 2004 [PMID:15525990] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1038/nature03071] [ PMID:15525990] Lickert H, Takeuchi JK, Von Both I, Walls JR, McAuliffe F, Adamson SL, Henkelman RM, Wrana JL, Rossant J, Bruneau BG 2004 Baf60c is essential for function of BAF chromatin remodelling complexes in heart development. Nature (432):107-12
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE