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EMAGE:5101

Lhx8 LIM homeobox protein 8 ( MGI:1096343)
TS16 (10 dpc)
in situ hybridisation

Data Images
EMAGE:5101 EMAGE:5101 EMAGE:5101 EMAGE:5101 EMAGE:5101
Raw signal output, as movie. All sections along the X-axis, as movie. All sections along the Y-axis, as movie. All sections along the Z-axis, as movie. Photograph prior to 3D imaging.
EMAGE:5101 EMAGE:5101
Photograph prior to 3D imaging. Sample morphology following 3D imaging, as movie

View 3D opt image: EMAGE genex expression entry
Download 3D images in woolz format
Expression pattern clarity: three stars
Notes:
This is a traditionally produced wholemount in situ hybridisation stained using alkaline phosphatase + BM Purple. It has been imaged using Optical Projection Tomography. The visible channel depicting the signal has been false-coloured green and the fluorescence channel depicting autofluorescence has been false-coloured blue.
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
1st branchial arch maxillary component
strong strong
homogeneous
1st branchial arch mandibular component
strong strong
regional
2nd branchial arch ectoderm
moderate moderate
regional
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Lhx8_cloneB
Entity Detected:Lhx8, LIM homeobox protein 8 ( MGI:1096343)
Sequence:sense strand is shown

>Lhx8_cloneB
TGCCCCGGGCTCATGTCGGAGGAGTGCGGGCGGCCTGCAGCCCTGGCGGCCGGGAGGACCCGCAAAGGCG
CTGGGGAAGAAGGACTGGTGAATCCCGAGGGAGCCGGGGACGAGGACTCCTGCTCCTCCTCGGCCCCGCT
TTCCCCGTCGTCCTCGCCCCAGTCCATGGCCTCGGGCTCCGTGTGCCCGCCAGGCAAGTGTGTGTGCAGC
AGCTGCGGCCTGGAGATTGTGGACAAATACCTCCTCAAGGTGAATGACTTATGCTGGCATGTCCGCTGTC
TCTCCTGCAGTGTCTGCAGAACGTCCCTGGGAAGGCACACGAGCTGCTACATTAAGGATAAAGATATTTT
CTGTAAACTCGATTACTTCAGACGGTATGGGACCCGCTGTTCCCGCTGTGGCAGGCACATCCACTCGACT
GACTGGGTCCGCAGGGCCAAGGGCAACGTGTATCACCTGGCCTGCTTTGCCTGCTTTTCTTGCAAGAGGC
AGCTGTCCACGGGAGAGGAGTTCGCCTTGGTGGAGGAGAAGGTCCTCTGTAGAGTGCACTTTGACTGCAT
GCTGGACAATCTGAAGAGAGAAGTGGAGAACGGTAATGGGATTAGTGTGGAAGGAGCCCTTCTCACAGAG
CAAGACGTCAATCATCCAAAGCCAGCCAAAAGAGCTCGGACCAGCTTCACAGCCGATCAGCTCCAGGTTA
TGCAAGCACAGTTCGCTCAGGACAACAACCCAGATGCACAGACCCTCCAGAAACTGGCAGAAAGGACAGG
CTTAAGCAGACGTGTCATACAGGTGTGGTTTCAGAACTGCAGG
nt 199 - nt 1011 of BC125281.1
Notes:Lhx8 probe fragment (960nt) in pBluescript was kindly donated by Dr. Abigail Tucker. The antisense probe was transcribed with the T7 polymerase after linearisation with NotI. Probe available on request.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:10 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:opt
Procedures
Fixation:4% paraformaldehyde
Embedding:agarose
Staining procedure:alkaline phosphatase + BMpurple
General Information
Authors:Laura Ward, Mike Dixon
Principal investigator:Mike Dixon, University of Manchester, Faculty of Life Sciences Michael Smith Building Oxford Road, Manchester, England M13 9PT
Submitted by:Laura Ward, University of Manchester, Faculty of Life Sciences Michael Smith Building Oxford Road, Manchester, England M13 9PT
Experiment type:screen
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceFACEBASE