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EMAGE:5140

Csda cold shock domain protein A ( MGI:2137670)
TS19 (11.5 dpc)
in situ hybridisation

Data Images
EMAGE:5140
Fig1D of [doi:10.1128/MCB.01196-06] Mol Cell Biol 2006 26(22): 8410-8417 [PMID:16954378] Lu ZH; Books JT; Ley TJ, "Cold Shock Domain Family Members YB-1 and MSY4 Share Essential Functions during Murine Embryogenesis." © ASM. Reproduced with permission from Molecular and Cellular Biology. Reuse of any Licensed Material requires permission from ASM. Copyright 2006.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: Lnp, lateral nasal process; mb, mandibular process; fl, forelimb; hl, hindlimb; bs, brainstem; sm, somite.
Expression Pattern Description
Spatial Annotation:
EMAGE:5140Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5140_wholemount_moderate_3D_1.wlz
5140_wholemount_possible_3D_1.wlz
5140_wholemount_strong_3D_1.wlz
5140_wholemount_weak_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5140_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
Expression is present throughout embryonic tissues.
forelimb bud
strong strong
hindlimb bud
strong strong
trunk somite
strong strong
latero-nasal process
strong strong
mandibular process
strong strong
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3700656
Entity Detected:Csda, cold shock domain protein A ( MGI:2137670)
Notes:The Csda (MSY4) probe used in this study by Lu et al., 2006 [PMID:16954378] is described as follows: "The plasmid containing MSY4 cDNA was linearized with SmaI, and used for generation of the RNA probes for mouse MSY4 mRNAs using T7 RNA polymerase." Editors note: The identity of the plasmid is not reported.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:11.5 dpc
Theiler Stage:TS19
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Lu ZH; Books JT; Ley TJ, 2006 [PMID:16954378] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1128/MCB.01196-06] [ PMID:16954378] Lu ZH, Books JT, Ley TJ 2006 Cold shock domain family members YB-1 and MSY4 share essential functions during murine embryogenesis. Mol Cell Biol (26):8410-7
Links:MGI:3700683 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI