Type: | in situ hybridisation probe |
Identifier: | Tapt1 probeA |
Entity Detected: | Tapt1, transmembrane anterior posterior transformation 1 ( MGI:2683537) |
Sequence: | sense strand is shown
>Tapt1 probeA
CTGGATGCTGACACTTGAACACTTCCTCCTGCGTGGCCAACAGCAGTGCTGCTTCCAGCACCTGGCCAAG
CACTGCAGAAGCTCCTTTCCTTCGTCAGCCTGGGCTTCCAGATCGTCGGGTTCTCCTCAAGGCCTCTTCA
GGATAAGGACACACCTGGGAAACTGTGACGCTTCTACCATGAGTTCCCTTTCCAGCCTCAGACTGTCTCC
ACACACTCTTTCCAGACTTGACTCCATCTGCCAAAGCATTGACAAGTTGCTACATCTAAGTCCAGATGAC
GTTCTTACCACCAGAGTCATCCTTGGCAATACATCTGAGCTAGTCAGAACAGAAGGCCACTTAACTACAA
CGTGGTGAATAGCAGCGTCCTATGAGAAACAGTGAGCTCTTGGCCCAGTCATTTACTTTATAAAGGTCAT
GTGTCACTGAGAAATGCTTCCTGCTGCCTCGGTTACTCAGGGCAGAGTGTGAGCTGTGTGACACGGGCCC
AGTGACAATAAAAGGCACAGAGCAATGTCAACAGAGTAAAAGGCACAAGTGCAGTGTGACCTGGCTTTGC
TTTAAGGCTAATTGCTTCATTGGTTATTCCAAGTTAAAGG
|
| nt 1897 - nt 2496 of NM_173764.3 |
Notes: | The Tapt1 probe used in this study by Howell et al, 2007 [PMID:17151244] is described as follows: "A Tapt1 riboprobe vector was generated by amplifying a 608-bp RT-PCR product corresponding to nucleotides 1760-2368 of the cDNA, using the following primers that contained SP6 and T7 primer sites, respectively: H3RS7F, GCGATTTAGGTGACACTATAGAATACTGGATGCTGACACTTGAACA; H3RS7R GCGTAATACGACTCACTATAGGGAGACCTTTAACTTGGAATAACCAATG. The amplimer was in vitro transcribed, incorporating digoxygenin-dUTP."
Editors note: the amplified region corresponds to nt1897-2496 of the Tapt1 mouse cDNA RefSeq NM_173764.3. |
Chemistry: | RNA |
Strand: | antisense |
Label: | digoxigenin |