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EMAGE:5159

Tcirg1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 ( MGI:1350931)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5159
Fig9C. of [doi:10.1359/jbmr.2001.16.6.1136] Deng W; Stashenko P; Chen W; Liang Y; Shimizu K; Li YP. 2001 "Characterization of Mouse Atp6i Gene, the Gene Promoter, and the Gene Expression" J Bone Miner Res 16(6):1136-46 [PMID:11393791] .

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5159Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5159_wholemount_moderate.wlz
5159_wholemount_possible.wlz
5159_wholemount_notDetected.wlz
5159_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5159_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
regionalExpressed in "anterior regions"
forelimb bud
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Tcirg1 probeA
Entity Detected:Tcirg1, T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 ( MGI:1350931)
Notes:The Tcirg1 (ATP6I) probe used in this study by Deng et al., 2001 [PMID:11393791] was transcribed from "a 2.6-kb cDNA fragment containing the entire ATP6I coding region".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + unspecified
General Information
Authors:Deng W; Stashenko P; Chen W; Liang Y; Shimizu K; Li YP. 2001 [PMID:11393791] . Indexed and spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1359/jbmr.2001.16.6.1136] [ PMID:11393791] Deng W, Stashenko P, Chen W, Liang Y, Shimizu K, Li YP 2001 Characterization of mouse Atp6i gene, the gene promoter, and the gene expression. J Bone Miner Res (16):1136-46
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE