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EMAGE:5183

Traf4 TNF receptor associated factor 4 ( MGI:1202880)
TS15 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5183 EMAGE:5183
Fig 3C Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00192-5] Mech Dev 71: 187-91, Masson R; Regnier CH; Chenard MP; Wendling C; Mattei MG; Tomasetto C; Rio MC, Tumor necrosis factor receptor associated factor 4 (TRAF4) expression pattern during mouse development. Copyright 1998. [PMID:9507120] Fig 3D Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00192-5] Mech Dev 71: 187-91, Masson R; Regnier CH; Chenard MP; Wendling C; Mattei MG; Tomasetto C; Rio MC, Tumor necrosis factor receptor associated factor 4 (TRAF4) expression pattern during mouse development. Copyright 1998. [PMID:9507120]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Whole mount in situ hybridization of embryos using antisense (C) and sense (D) digoxigenin-labeled TRAF4 riboprobes. Image annotations: Small and large arrows: NCC-colonized branchial arches and craniofacial NCC condensations, respectively; stars, limb buds.
Expression Pattern Description
Spatial Annotation:
EMAGE:5183Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5183_wholemount_moderate.wlz
5183_wholemount_weak.wlz
5183_wholemount_notDetected.wlz
5183_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5183_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
2nd branchial arch mesenchyme derived from neural crest
detected detected
3rd branchial arch mesenchyme derived from neural crest
detected detected
1st branchial arch mandibular component mesenchyme derived from neural crest
detected detected
1st branchial arch maxillary component mesenchyme derived from neural crest
detected detected
trigeminal v preganglion
detected detected
facio-acoustic vii-viii preganglion complex
detected detected
limb
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Traf4 probeA
Entity Detected:Traf4, TNF receptor associated factor 4 ( MGI:1202880)
Notes:The Traf4 probe used in this study by Masson et al, 1998 [PMID:9507120] is described as "digoxigenin-labeled sense or antisense TRAF4 cDNA (2003 bp)". Editors Note: Elsewhere the authors describe the cloning of a 2043 nucleotide TRAF4 cDNA (EMBL accession number X92346). It is not specified which 2003 of the 2043 nucleotides the probe covers.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Staining procedure:alkaline phosphatase + unspecified
General Information
Authors:Masson R; Regnier CH; Chenard MP; Wendling C; Mattei MG; Tomasetto C; Rio MC. 1998 [PMID:9507120] . Indexed and spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(97)00192-5] [ PMID:9507120] Masson R, Regnier CH, Chenard MP, Wendling C, Mattei MG, Tomasetto C, Rio MC 1998 Tumor necrosis factor receptor associated factor 4 (TRAF4) expression pattern during mouse development. Mech Dev (71):187-91
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE