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EMAGE:5249

Emilin3 elastin microfibril interfacer 3 ( MGI:2389142)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5249
Fig4C. Copyright: Reprinted with permission from Elsevier from [doi:10.1006/dbio.2002.0764] Dev Biol 249(2): 204-218, Leimeister C; Steidl C; Schumacher N; Erhard S; Gessler M, Developmental expression and biochemical characterization of Emu family members. Copyright 2002 [PMID:12221002]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: tb - tailbud; hg - hindgut.
Expression Pattern Description
Spatial Annotation:
EMAGE:5249Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5249_wholemount__moderate.wlz
5249_wholemount__notDetected.wlz
5249_wholemount__strong.wlz
5249_wholemount__weak.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5249_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
tail
detected detected
regionalThe authors state "Emilin3 expression is only observed in the tailbud and the hindgut".
hindgut
detected detected
The authors state "Emilin3 expression is only observed in the tailbud and the hindgut".
hindgut diverticulum
detected detected
The authors state "Emilin3 expression is only observed in the tailbud and the hindgut".
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Emilin3 probeA
Entity Detected:Emilin3, elastin microfibril interfacer 3 ( MGI:2389142)
Sequence:sense strand is shown

>Emilin3 probeA
GTGACAGACCTGGCTTGGCGCTGCTGCCCTGGTCTTACTGGGGAAAGCTGCCCTGAACACCTCACAGACC
ATGGAGCCACCCCACCCCACCAGGAGCCAGAGCCTCAGATTCCCTTGGGGCAGCTGGGCCCAGGTCCCAG
GCCTTCTCCTTACAGCAGAGAGGCCCCGCGCCCCCGTGGCTTTGGGGTCATCCCCGAGGGTCTTGTGGCC
CCAGAAGACAGAGGCAGAGGACCACTCATCCCTCCTCTGAGTGAGATCCTGAGCAAGGTCACAGAGGTGA
GCAACACATTACAGACCAAGGTGCAGCTGTTAGATGAGGTGCGTGGGCTGGCCCTGGGGCATGAGGCTCA
CCTGCAGCGGCTCCGGGAAGCCCCGCCATCCCCGCTGACCTCCTTAGCGCTCCTAGAGGAATACGTGGAC
CAGCGGCTGCAGCGACTCTGGGGGAGCCTGCTGGATGGCTNTGAGCAGAAGCTGCAAGGTGTCCAGAGCG
AGTGTGACCTT
Notes:The Emilin3 probe used in this study by Leimeister et al., 2002 [PMID:12221002] is described being generated from the IMAGE clone (GenBank Accession No. AW701511).
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Leimeister C; Steidl C; Schumacher N; Erhard S; Gessler M, 2002 [PMID:12221002] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1006/dbio.2002.0764] [ PMID:12221002] Leimeister C, Steidl C, Schumacher N, Erhard S, Gessler M 2002 Developmental expression and biochemical characterization of Emu family members. Dev Biol (249):204-18
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE