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EMAGE:5315

Eya3 eyes absent 3 homolog (Drosophila) ( MGI:109339)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5315
Fig 3F. Copyright: This image is from Xu PX; Woo I; Her H; Beier DR; Maas RL, Development 1997;124(1):219-31 and is displayed with the permission of The Company of Biologist Limited who owns the Copyright. [PMID:9006082]

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: e - eye; b - brain; br - branchial arch mesenchyme; fl - forelimb.
Expression Pattern Description
Spatial Annotation:
EMAGE:5315Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5315_wholemount__moderate.wlz
5315_wholemount__possible.wlz
5315_wholemount__notDetected.wlz
5315_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5315_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
head mesenchyme
detected detected
branchial arch
detected detected
detected in the branchial arch mesenchyme.
brain
detected detected
limb
detected detected
rhombomere 01
detected detected
Data not shown
rhombomere 02
detected detected
Data not shown
rhombomere 03
detected detected
Data not shown
rhombomere 04
detected detected
Data not shown
rhombomere 05
detected detected
Data not shown
rhombomere 06
detected detected
Data not shown
rhombomere 07
detected detected
Data not shown
rhombomere 08
detected detected
Data not shown
lens pit
detected detected
expressed in the lens vesicle
optic cup
detected detected
expressed in the neuroretina.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Eya3 probeA
Entity Detected:Eya3, eyes absent 3 homolog (Drosophila) ( MGI:109339)
Sequence:sense strand is shown

>Eya3 probeA
AGACGGCTGCAGACACTGCAATTCAGTCCCCTAAGTGTGTTAGGAGATAGTCGTCCTCATGGAAGAAGAG
CAAGACCTACCAGAGCAACCGTCAAGTAAACAACCCAGATGCCAGTGATGAGAAGCCTGAGACATCCAGC
CTTGCGTCAAATCTCAGCATGTCAGAGGAAATTATGACATGCACCGATTACCTCCCTCGCTCATCCAATG
ATTATACCTCACAAATGTATTCTGCAAACTTCAAGCACAAATGCCAGCCTGATACCCACTTCATCTGCAA
TTGCCAATATTCCAGCAGCAGCTGTGGCCAGCATCTCAAACCAGGATTATCCCACCTATACTATTCTTGG
ACAGAATCAGTACCAGGCCTGCTACCCCAGTTCCAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGCT
GAGACCACAACATTAGCAGCTACAACATACCAGACGGAGAAGCCTAGTGCTATGGTGCCTGCACCAGCCA
CACAGAGGCTTCCCTCCGACTCCTCTGCAAGCCTACCTTTGTCCCAGACTACACCAAATAAAGATGCTGA
TGATCAGGCCAGGAAAAACATGACTGTCAAGAACCGGGGCAAGAGGAAAGCTGATGCCAGCTCTTCCCAG
GACAGTGAATTGGAACGGGTATTTCTCTGGGACTTGGACGAAACCATCATCATCTTTCATTCCCTTCTCA
CTGGATCCTATGCTCAGAAGTATGGAAAGGACCCAACAGTAGTAATTGGCTCAGGTTTAACCATGGAAGA
AATGATTTTTGAAGTGGCTGATACACATCTATTTTTCAATGACTTAGAGGAGTGTGACCAGGTGCATGTG
GAAGATGTGGCTTCTGATGACAATGGCCAGGATTTGAGCAACTACAGTTTCTCCACAGATGGTTTCAGTG
GTTCAGGAGGCAGTGGTAGCCACGGTTCATCTGTGGGCGTTCAGGGAGGTGTGGACTGGATGAGGAAACT
GGCCTTTCGCTACCGAAAAGTGAGGGAAATCTATGACAAGCATAAAAGCAATGTGGGTGGCCTCCTCAGC
CCCCAGAGGAAGGAAGCACTGCAGAGACTCAGAGCAGAGATCGAGGTGCTGACGGACTCCTGGTTAGGAA
CTGCGCTCAAGTCCTTGCTTCTCATCCAGTCTCGAAAGAACTGTGCGAATGTTCTGATCACTACCACGCA
GTTGGTTCCAGCCCTGGCCAAGGTTCTCCTGTATGGACTAGGAGAGATATTTCCTATTGAAAACATCTAC
AGTGCTACCAAAATCGGTAAGGAGAGCTGCTTTGAGAGAATTGTTTCGAGGTTTGGGAAAAAAGTCACAT
ATGTAGTGATTGGAGATGGACGAGATGAAGAAATTGCAGCCAAGCAGCACAACATGCCCTTCTGGAGGAT
CACAAACCACGGAGATCTGGTGTCCCTGCACCAGGCTTTAGAGCTTGACTTCCTCTGAGAACTGGAATGT
GGACCCTTCCTTCCTTGTGAGCTTCTCTTTACCTCCAACAGGAGCCAGAAGCCAGAACCCTCTGAGCCCC
TTCTCTCCTGTCTGTCTCTCGGGTCTCAGTGCCCCCTCCCCCTTCTCTTCTGCTCTTTCTCCCTCCATGA
AATGCTGGCGAGAACACAATCAGAACCAACAACTGCAGTTATTCTGAGTGAGCTGCAGCCCATGTTCCCT
GTACAGCAAGAGGTGGCTGGATAGAGCTGCAGACCGGCTGCCGCTACCGTGCTTTAATTTTTCTGTTTCA
ATTGAAAAAGGAAGAACAAGAAAAGCCGACGTTGGGCACAGTTGTACTCTTGCTCGATGACGGACTGACC
GGGAGCTGCTCCTGATGTTGTGGATGGAAACTGTCCCCTTGAGATCGTCTTCTGGTCTCTTAGCTATAGA
ATGTCTCTCCCAGTGAATGGGTATGTTATTTTTATAGGTGAGGGTCTGGCCTCTACAGCAGCCTCCCCCA
CTTTTCTATGAAGAAAGCCGTGTGTAAAGTTTCCGTGACAGTAGTAATGGAAATATCTAAAATACCTCCG
TGACTGACAGGACAGAGGCTCCAGTGCTCTGCTCCCTGGGGAGGCTCCTTGCCATCTACAAGGCCCTGGT
CACTTATTTTAGACTGTGGCATCTCCCATCTTGTAAGCCTCGGTCTCCTTGGCAGTCCTCCTTCATCTGT
AACTAAATGGCACAACCCTGGAAACTCCTTCCCATAGACAATAAATCTAAGCCTTTAGCTTGTACTTCAG
AAGTTCTGTCCCAGGAGGCTCAGCCTCCAGACTGGAGAGAAGGGCTCAGATTTCTTAGGACTTTCACCTC
GTGCTCCTGCAGAGCAGTACCTGTTCCCAGCAGATGCTTCCTCTGTGGTCGGCTCAGTCGTCAGATGCTG
GCCTCACGTCCTGTCCTCACAGCTACCTGTCTCTGTGCAGCTCTGGCCAGCCCCTACCCACTCATTGCAA
GTCAGAAAGGCCAAGGGGGCAGGCTCTAGCTGCCTCCTTCACCTGCACTTACATGCGGTGATCCCGCCTT
GTATTTATACAGATCTCTGCCTACGAGTGGAGAGCAGAGAGCTAGAGTCAAAACCCATGAAATATCCCAC
TGCTTAGAGTCCATGCTGAAGTGGGAAACCAGGCCAGAAAGACTTTCTTGACTTAAGTGCTTAAAAATAC
AATCCTGAGCTAGTGCAAGAGCACCTCTCAAGGCTGCCCCTAGTCAGTCAGGAGGGAAACTGGGCCTTAG
TGCCAGCCCGCAAGCCCAGCTGTGTTTTGGTTTTATTTTGGTTTTTGTTTGGGTTTTTTGTTTGTTTTTT
ACGGCACTATCCCTTCAGGACCAATGTCGGTGCCTGTTTAATTGGGTTAAAGCTCCCTAGAGTTGAGGAA
ATGTGCAGCCTTGGTCTTCAGGAGGTCCTTGACCAACCCCTAGCTATAGTCACTGTCCGCAGATACCACA
GCCCAGAGGCAAAATTCCTCTTCATGCTAGGCTACCAGATAACGACAGGAAGGCTGAGCACCACCTTCAG
GACTGTTGACGCTTCTGAGTACTTCTGAGACCAGCAGTTGAGGAAGGGGCTCAGACAGGAGGTGAGGTTT
GTGTCTTGGCCATTCATTTGGCTTTGTTGTGAGGTACTGGGTGGGAGAAAGGAGCTAGAGTCTAAGTCAG
AGCCCTCCTAGGCTGCCATTAGCACCACACCGCTACCCTAGTCTAGCCAGCCTTGCTTGGTGGTCCAACC
TGGGAAACTCCAGGATGAGTTTTACTTCCAAGTCTCAGTCCTTCCCTCATTAACAGTGGAGTTTCTTGTG
CTGGACAAGGCCACCTATTAGTGCTGTGCTTCAGGCTCACCAGACTGCCAAGTGGCGACACACCCTTCTG
CACACAGGTACCACCACAAACACTTCAGGGGAGACTCTTCTTAGATATAACAGGTAATCCCTTTCCTCTT
GCCCTGACTGGAGAGGCAAGGAGGTGTTCTGAGCTGAGTGGCTACTGTTCCCAAAGCAGCTACCCTGTCA
GGGTAGACAGAGGAGTGCATTGGTCTCTCCAGGGACTGC
nt 1 - nt 3539 of U61112.1
Notes:The Eya3 probe used in this study by Xu et al., 1997 [PMID:9006082] is decribed as "Eya3 cDNA insert in pBluescript II KS+". Editors note: a 3539 bp Eya3 cDNA sequence is shown in Fig1C therein and designated as U61112 by the authors - it is assumed this is the "Eya3 cDNA" referred to.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:0.1% Triton X-100/3.7% formaldehyde
Staining procedure:alkaline phosphatase + unspecified
General Information
Authors:Xu PX; Woo I; Her H; Beier DR; Maas RL, 1997 [PMID:9006082] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9006082] Xu PX, Woo I, Her H, Beier DR, Maas RL 1997 Mouse Eya homologues of the Drosophila eyes absent gene require Pax6 for expression in lens and nasal placode. Development (124):219-31
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE