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EMAGE:5338

Fgf17 fibroblast growth factor 17 ( MGI:1202401)
TS17 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5338
Fig 3E. Copyright: This image is from Zhong W; Jiang MM; Schonemann MD; Meneses JJ; Pedersen RA; Jan LY; Jan YN, Proc Natl Acad Sci U S A 2000 Jun 6;97(12):6844-9. [PMID:10841580] Copyright 2000 National Academy of Sciences, U.S.A.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: arrow indicates expression at the midbrain-hindbrain junction.
Expression Pattern Description
Spatial Annotation:
EMAGE:5338Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5338_wholemount__strong.wlz
5338_wholemount__moderate.wlz
5338_wholemount__possible.wlz
5338_wholemount__notDetected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5338_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
hindbrain
detected detected
regionalFgf17 is expressed at the junction between midbrain and hindbrain in wild-type E9.5 embryos.
midbrain
detected detected
regionalFgf17 is expressed at the junction between midbrain and hindbrain in wild-type E9.5 embryos.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Fgf17 probeC
Entity Detected:Fgf17, fibroblast growth factor 17 ( MGI:1202401)
Notes:The Fgf17 probe used in this study by Zhong et al., 2000 [PMID:10841580] is described as a 540-bp NcoI-SpeI fragment. Editors Note: there are no NcoI or SpeI sites in the Fgf17 mRNA RefSeq NM_008004.4 - it is assumed these sites are linker/vector derived.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Zhong W; Jiang MM; Schonemann MD; Meneses JJ; Pedersen RA; Jan LY; Jan YN, 2000 [PMID:10841580] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1073/pnas.97.12.6844] [ PMID:10841580] Zhong W, Jiang MM, Schonemann MD, Meneses JJ, Pedersen RA, Jan LY, Jan YN 2000 Mouse numb is an essential gene involved in cortical neurogenesis. Proc Natl Acad Sci U S A (97):6844-9
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE