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EMAGE:5359

Zeb2 zinc finger E-box binding homeobox 2 ( MGI:1344407)
TS16 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5359 EMAGE:5359
Figure 3Ba. [doi:10.1002/dvdy.20799] Copyright: This image is from Miyoshi T; Maruhashi M; Van De Putte T; Kondoh H; Huylebroeck D; Higashi Y, "Complementary expression pattern of Zfhx1 genes Sip1 and deltaEF1 in the mouse embryo and their genetic interaction revealed by compound mutants." Dev Dyn 2006; 235: 1941-1952. Reprinted with permission of Wiley-Liss Inc. [PMID:16598713] Figure 3Bc. [doi:10.1002/dvdy.20799] Copyright: This image is from Miyoshi T; Maruhashi M; Van De Putte T; Kondoh H; Huylebroeck D; Higashi Y, "Complementary expression pattern of Zfhx1 genes Sip1 and deltaEF1 in the mouse embryo and their genetic interaction revealed by compound mutants." Dev Dyn 2006; 235: 1941-1952. Reprinted with permission of Wiley-Liss Inc. [PMID:16598713]

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: 'drg', dorsal root ganglion; 'tg', trigeminal ganglion. In a, 'c' indicates the level of section shown in Figure 3Bc.
Expression Pattern Description
Spatial Annotation:
EMAGE:5359Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5359_wholemount__moderate.wlz
5359_wholemount__weak.wlz
5359_wholemount__possible.wlz
5359_wholemount__strong.wlz
5359_wholemount__notDetected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5359_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trigeminal v ganglion
strong strong
dorsal root ganglion
strong strong
neural tube
detected detected
regionalExpression starts to decrease from E10.5 on in the ventral horn of the spinal cord where motoneurons start to differentiate.
facio-acoustic vii-viii ganglion complex
strong strong
glossopharyngeal-vagus ix-x ganglion complex
strong strong
telencephalon
strong strong
diencephalon
strong strong
future midbrain
strong strong
future hindbrain
strong strong
future spinal cord
strong strong
tail unsegmented mesenchyme
strong strong
notochord
not detected not detected
homogeneous
forelimb bud mesenchyme
not detected not detected
homogeneous
hindlimb bud mesenchyme
not detected not detected
homogeneous
left lung rudiment mesenchyme
moderate moderate
right lung rudiment mesenchyme
moderate moderate
trachea
not detected not detected
homogeneous
foregut
not detected not detected
homogeneous
hindgut
not detected not detected
homogeneous
midgut
not detected not detected
homogeneous
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Zeb2 probeA
Entity Detected:Zeb2, zinc finger E-box binding homeobox 2 ( MGI:1344407)
Sequence:sense strand is shown

>Zeb2 probeA
CAGTGGCGAGATTCTGCAAGCCTCTGTAGCCGGTCCAGAAGAAATGAAGGAAGATTATGATGCAATGGGG
CCAGAAGCCACGATCCAGACCACAATTAACAATGGTACAGTTAAGAATGCAAATTGCACATCAGACTTTG
AGGAATACTTTGCCAAAAGAAAACTGGAGGAAAGAGATGGCCACGCAGTGAGCATCGAAGAGTACCTTCA
GCGAAGCGACACGGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCC
AACGGGCAAGAAGAAAATGACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCCT
ACTGCGACCGCGGCTACAAGCGCTTGACATCGCTGAAGGAGCACATCAAGTACCGCCACGAGAAGAATGA
AGAGAACTTTTCCTGCCCTCTTTGTAGCTACACGTTCGCCTACCGCACCCAGCTCGAGAGGCATATGGTG
ACGCACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAGCAGGTAACCGCAAGTTCAAGTGCA
CGGAGTGTGGCAAGGCCTTCAAGTACAAGCACCACCTGAAAGAACACCTGAGAATTCACAGTGGTGAAAA
ACCTTACGAATGCCCAAACTGCAAGAAACGCTTCTCTCATTCTGGGTCCTACAGTTCACATATCAGCAGC
AAGAAATGTATTGGTTTAATATCAGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTA
ATTCTGTTTCTTCTTCTCCTACTAACTCAGCCATTACTCAGTTAAGGAACAAGTTGGAAAATGGAAAACC
ACTTAGCATGTCTGAGCAGACAGGCTTACTTAAGATTAAAACAGAACCACTAGACTTCAATGACTATAAA
GTTCTTATGGCAACACATGGGTTTAGTGGCAGCAGTCCCTTTATGAACGGTGGGCTTGGAGCCACCAGCC
CTTTAGGTGTACACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACT
TGGATTTCCCACTATGAATAGTAACTTGAGTGAGGTACAAAAGGTTCTACAGATTGTGGACAATACGGTT
TCTAGGCAAAAGATGGACTGCAAGACGGAAGACATTTCAAAGTTGAAAGGTTATCACATGAAGGATCCAT
GTTCTCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTTCCAGTAGTGAGTCA
TAACGGTGCCACTAAAAGTATTATTGACTATACCTTAGAGAAAGTCAATGAAGCCAAAGCTTGCCTCCAG
AGCTTGACCACCGACTCAAGGAGACAGATCAGTAACATAAAGAAAGAGAAGTTGCGTACTTTGATAGATT
TGGTCACTGATGATAAAATGATTGAGAACCACAGCATATCCACTCCATTTTCATGCCAGTTCTGTAAAGA
AAGCTTCCCGGGCCCTATTCCCCTGCATCAGCATGAACGATACCTGTGTAAGATGAATGAAGAGATCAAG
GCAGTCCTGCAACCTCATGAAAACATAGTCCCCAACAAAGCTGGAGTTTTTGTTGATAATAAAGCCCTCC
TCTTGTCATCTGTACTTTCCGAGAAAGGACTGACAAGCCCCATCAACCCATACAAGGACCACATGTCTGT
ACTGAAAGCATACTATGCTATGAACATGGAGCCCAACTCTGATGAACTGCTGAAAATCTCCATTGCTGTG
GGCCTTCCTCAGGAATTTGTGAAGGAATGGTTTGAGCAAAGAAAAGTCTACCAGTATTCGAATTCCAGGT
CACCATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTT
ACCCAGGTCTCCTGTAAAACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTT
ACGAGTTGTGATCCTCCTCTCAGGCTAACAAAATCTTCCCATTTCACCAATATTAAAGCAGTTGATAAAC
TGGACCACTCGAGGAGTAATACTCCTTCTCCTTTAAATCTTTCCTCCACATCTTCTAAAAACTCCCACAG
TAGCTCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGACCTGTCATTACCA
AAACAAATGAGAGAACCCAAAGGTATTATAGCCACAAAGAACAAAACAAAAGCTACTAGCATAAACTTAG
ACCACAACAGTGTTTCTTCATCGTCTGAGAATTCAGATGAGCCTCTGAATTTGACTTTTATCAAGAAAGA
GTTTTCAAATTCTAATAACCTGGACAATAAAAGCAACAACCCTGTGTTCGGCATGAACCCATTTAGTGCC
AAGCCTTTATACACCCCTCTTCCACCACAGAGCGCATTTCCCCCTGCCACTTTCATGCCACCAGTCCAGA
CCAGCATCCCCGGGCTACGACCATACCCAGGACTGGATCAGATGAGCTTCCTACCGCATATGGCCTATAC
CTACCCAACGGGAGCAGCTACCTTTGCTGATATGCAGCAAAGGAGGAAATACCAGAGGAAACAAGGATTT
CAGGGAGACTTGCTGGATGGAGCACA
nt 335 - nt 2950 of NM_015753.1
Notes:The Zeb2 (Sip1) probe used in this study by Miyoshi et al., 2006 [PMID:16598713] is indicated as that originally described by van de Putte et al., 2003 [PMID:12522767] i.e. "Sip1 probe (NM_015753) (bp 335-2950)". Editors Note: when van de Putte's manuscript was accepted for publication on 29 October 2002, only the first version of NM_015753 (NM_015753.1) existed.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Miyoshi T; Maruhashi M; Van De Putte T; Kondoh H; Huylebroeck D; Higashi Y, 2006 [PMID:16598713] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.20799] [ PMID:16598713] Miyoshi T, Maruhashi M, Van De Putte T, Kondoh H, Huylebroeck D, Higashi Y 2006 Complementary expression pattern of Zfhx1 genes Sip1 and deltaEF1 in the mouse embryo and their genetic interaction revealed by compound mutants. Dev Dyn (235):1941-52
 [ doi:10.1086/346092] [ PMID:12522767] Van de Putte T, Maruhashi M, Francis A, Nelles L, Kondoh H, Huylebroeck D, Higashi Y 2003 Mice lacking ZFHX1B, the gene that codes for Smad-interacting protein-1, reveal a role for multiple neural crest cell defects in the etiology of Hirschsprung disease-mental retardation syndrome. Am J Hum Genet (72):465-70
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE