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EMAGE:5368

Zic5 zinc finger protein of the cerebellum 5 ( MGI:1929518)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5368 EMAGE:5368
Fig4B. [doi:10.1002/dvdy.20253] Copyright: This image is from Furushima K; Murata T; Kiyonari H; Aizawa S, "Characterization of Opr deficiency in mouse brain: Subtle defects in dorsomedial telencephalon and medioventral forebrain." Dev Dyn 2005; 232: 1056-61. Reprinted with permission of Wiley-Liss Inc. [PMID:15736266] Fig4A. [doi:10.1002/dvdy.20253] Copyright: This image is from Furushima K; Murata T; Kiyonari H; Aizawa S, "Characterization of Opr deficiency in mouse brain: Subtle defects in dorsomedial telencephalon and medioventral forebrain." Dev Dyn 2005; 232: 1056-61. Reprinted with permission of Wiley-Liss Inc. [PMID:15736266]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: cb, cerebral hemispheres; di, diencephalon; hy, hypothalamus; lt, lamina terminalis; rp, roof plate.
Expression Pattern Description
Spatial Annotation:
EMAGE:5368Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5368_wholemount__moderate.wlz
5368_wholemount__weak.wlz
5368_wholemount__notDetected.wlz
5368_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5368_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
diencephalon lamina terminalis
detected detected
midbrain
detected detected
regionalExpressed in the lamina terminalis and dorsal midline.
diencephalon
detected detected
regionalExpressed in the dorsal midline.
telencephalon
detected detected
regionalExpressed in most medial pallium or the cortical hem region.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2386259
Entity Detected:Zic5, zinc finger protein of the cerebellum 5 ( MGI:1929518)
Notes:The Zic5 (Opr) probe used in this study by Furushima et al., 2005 [PMID:15736266] is indicated as "Opr(3')" which is described by Furushima et al., 2005 [PMID:11044622] as a 709bp fragment isolated by 3' RACE.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Furushima K; Murata T; Kiyonari H; Aizawa S, 2005 [PMID:15736266] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.20253] [ PMID:15736266] Furushima K, Murata T, Kiyonari H, Aizawa S 2005 Characterization of Opr deficiency in mouse brain: subtle defects in dorsomedial telencephalon and medioventral forebrain. Dev Dyn (232):1056-61
 [ doi:10.1016/S0925-4773(00)00456-1] [ PMID:11044622] Furushima K, Murata T, Matsuo I, Aizawa S 2000 A new murine zinc finger gene, Opr. Mech Dev (98):161-4
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE