Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:5384

Gsx2 GS homeobox 2 ( MGI:95843)
TS18 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5384 EMAGE:5384
Figure 5K. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2007.01.035] Dev Biol 305: 52-62, Pachikara A; Dolson DK; Martinu L; Riccomagno MM; Jeong Y; Epstein DJ, "Activation of Class I transcription factors by low level Sonic hedgehog signaling is mediated by Gli2-dependent and independent mechanisms." Copyright 2007 [PMID:17321515] Figure 5L. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2007.01.035] Dev Biol 305: 52-62, Pachikara A; Dolson DK; Martinu L; Riccomagno MM; Jeong Y; Epstein DJ, "Activation of Class I transcription factors by low level Sonic hedgehog signaling is mediated by Gli2-dependent and independent mechanisms." Copyright 2007 [PMID:17321515]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
The approximate level of section L is shown in K.
Expression Pattern Description
Spatial Annotation:
EMAGE:5384Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5384_wholemount__moderate.wlz
5384_wholemount__weak.wlz
5384_wholemount__notDetected.wlz
5384_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5384_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
rhombomere 06
detected detected
regionalExpressed within the dI2 (interneuron) progenitor domain.
rhombomere 07
detected detected
rhombomere 08
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Gsx2 probeA
Entity Detected:Gsx2, GS homeobox 2 ( MGI:95843)
Notes:The Gsx2 (Gsh2) probe used in this study by Pachikara et al., 2007 [PMID:17321515] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Pachikara A; Dolson DK; Martinu L; Riccomagno MM; Jeong Y; Epstein DJ, 2007 [PMID:17321515] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.ydbio.2007.01.035] [ PMID:17321515] Pachikara A, Dolson DK, Martinu L, Riccomagno MM, Jeong Y, Epstein DJ 2007 Activation of Class I transcription factors by low level Sonic hedgehog signaling is mediated by Gli2-dependent and independent mechanisms. Dev Biol (305):52-62
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE