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EMAGE:543

Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A ( MGI:107558)
TS15 (9.25 dpc)
in situ hybridisation

Data Images
EMAGE:543
Fig 4e, Kawasaki et al, 2002 [PMID:11830568] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: arrow indicates the notochord. da, dorsal aorta; fl, the forelimb; dm, dermamyotome; nt, neural tube
Expression Pattern Description
Spatial Annotation:
EMAGE:543EMAGE:543Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
543_voxel_strong_3D_1.wlz
543_voxel_moderate_3D_1.wlz
543_voxel_weak_3D_1.wlz
543_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:543_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
forelimb bud
strong strong
trunk somite
detected detected
regionalExpression within the dermomyotome
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2176195
Entity Detected:Sema3a, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A ( MGI:107558)
Notes:The Sema3a probe used in this study by Kawasaki et al, 2002 [PMID:11830568] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.25 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:section
Procedures
Embedding:cryosection (10 micron thick section)
Staining procedure:alkaline phosphatase + unspecified
General Information
Authors:Kawasaki et al, 2002 [PMID:11830568] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11830568] Kawasaki T, Bekku Y, Suto F, Kitsukawa T, Taniguchi M, Nagatsu I, Nagatsu T, Itoh K, Yagi T, Fujisawa H 2002 Requirement of neuropilin 1-mediated Sema3A signals in patterning of the sympathetic nervous system. Development (129):671-80
Links:MGI:2176244 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI