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EMAGE:5621

Tpbg trophoblast glycoprotein ( MGI:1341264)
TS14 (9.0 dpc)
in situ hybridisation

Data Images
EMAGE:5621
Scale bar is 500 microns. Lateral view.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5621Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5621_wholemount_moderate_3D_1.wlz
5621_wholemount_weak_3D_1.wlz
5621_wholemount_notDetected_3D_1.wlz
5621_wholemount_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5621_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
The submitter describes the expression as widespread. The submitter also describes expression in the endoderm, anterior neuroectoderm and various other tissues.
future brain
detected detected
The submitter describes expression in the anterior neuroectoderm.
Annotation Validation: Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1814415
Entity Detected:Tpbg, trophoblast glycoprotein ( MGI:1341264)
Sequence:sense strand is shown

>MGI:1814415
GCAGCAGGAGCTGGGAAGGCGCGTGGACTCGGGTGGCCCTCGGAGTTGGCTTTGCAGGCGCGGGGTGCGG
AGGTCGCTCATCCGATCCTGCCCTGAGAGAGGCGCCAACAAAGGAGTTGAGGAGGTGCCACCCACCCCAG
CTGCGGCGGGAGGAGGAGCGCCAAGGCCCGTGTCCCGACCCGCCGTGCGTACTCACTGGAGGGAAGGGCG
GGGTGCCGCTCCGGGAGGGGGACGCCCGGTGGCTCGGGGTTAGCCAAGTTCCAGCTTTTGGCGTCCCCTC
CTCTGCTCCCACGCGAGGAAAGTTTGCCGTCGACGCTTGCGGCCGGCTCGCGCCCGCCGGGCCCAGGCGG
TCGAGTCTTCGGAGCGGGCGCTGTCCCAGCTCCGGGGAACCGCGAGCCGCGATGCCTGGGGCGGGCTCCC
GGGGCCCCTCCGCCGGGGACGGACGGCTGAGGTTGGCAAGGCTGGCGCTAGTGCTGCTGGGTTGGGTCTC
CGCGTCGGCCCCCAGCTCTTCGGTACCCTCGTCTTCCACCTCCCCGGCAGCCTTCCTGGCCTCGGGGTCT
GCGCAGCCTCCGCCAGCCGAGAGATGCCCCGCGGCGTGCGAGTGCTCCGAGGCGGCGCGCACGGTTAAGT
GCGTGAACCGCAACCTGCTGGAGGTGCCGGCGGATCTACCGCCTTACGTGCGCAACCTTTTCCTTACCGG
CAACCAGATGACCGTGCTCCCCGCGGGCGCCTTCGCCCGCCAGCCGCCGCTCGCCGACCTGGAGGCGCTC
AACCTCAGCGGCAACCACCTGAAGGAGGTGTGTGCAGGTGCCTTCGAGCATCTGCCGGGTCTGCGCCGGC
TTGACCTCAGCCACAACCCTCTCACCAACCTCAGCGCCTTCGCCTTTGCGGGCAGCAACGCCAGCGTCTC
GGCCCCCAGCCCCCTGGAGGAGCTGATCCTGAATCACATCGTGCCCCCTGAGGATCAGAGGCAGAACGGG
AGCTTCGAGGGTATGGTGGCCTTCGAAGGCATGGTGGCAGCAGCTCTGCGCTCAGGCCTTGCACTCCGAG
GTCTTACATGCCTGGAGCTAGCCAGCAATCACTTTCTTTTCCTGCCTCGGGACTTACTAGCCCAACTGCC
GAGTCTCAGATACCTGGACCTCAGGAACAATTCCCTGGTGAGCCTGACCTACGCATCCTTCCGCAACCTG
ACACACCTCGAAAGCCTCCACTTGGAGGACAATGCCCTCAAGGTCCTTCACAACTCCACCTTGGCTGAGT
GGCAAGGCCTGGCTCATGTCAAGGTGTTCCTGGACAACAATCCCTGGGTTTGCGACTGCTACATGGCTGA
CATGGTGGCTTGGCTTAAAGAGACAGAGGTGGTGCCAGATAAAGCCAGGCTTACCTGCGCATTCCCGGAG
AAGATGAGGAATCGTGGCCTCTTAGACCTCAACAGCTCTGACCTGGACTGTGACGCTGTCCTTCCCCAAT
CCCTGCAGACTTCCTATGTCTTCCTAGGTATTGTTTTAGCTCTGATAGGCGCTATTTTCCTCCTCGTTTT
GTATTTGAACCGTAAAGGCATAAAAAAGTGGATGCATAACATCAGAGATGCCTGCAGGGATCACATGGAA
GGGTATCATTACAGATACGAAATCAATGCGGACCCCAGATTAACAAATCTTAGTTCCAACTCGGATGTCT
GAGAAACAGGACCCATCAAGGAGGACTCTGCATGAGGTGTAGACTTAAGGGTTTTTTTTTTCCCCTTTAC
TAGGCTTGCTCCACTTCCACACTTCACCGTAGACACTATTGACTTTGATCCTTGTTATGTAAAATCCCGG
TGTGTTCTGTTAATGTAAGGACATGAACAACTGCACATGTTTATTTTCCCTATTCCTTTCGGTACTCCTC
GATGCCTGCGGAGGGATTGTTTTTTTTTCTCTCTCTCTCAAGTCGCAGCATGGACTTGGATTAGTTCAGT
TCAAGGTGTAGCACAGATAACATTCAACGGAAGCTGCCTCAGTTTTTTTTTTTTTTTGAGAAAAGTACTT
TATTCATAAATATGAGTTTCATCCTCACCTACCTAAATGATGGAGGAAATATTGCATCCCCAAACTGCCT
GCAGACCGTAGCAAGCTCTTACATAGAACTTTGTAGTGCATAGGAGCACCTGCATCCAAGAGCATGCGTA
CATTTTACTGTTCTGCATATTAAAAAGAAAAAGTTGCAACTTCAGATAACTTCTTTGACAAACTAAATTA
CTTTTTGATTGCAGTTTATAGGAAACTGACCTGAGATTTTTCGGTGTTTTTTTTTGTTTGTTTGTTTTGG
TTTTGTTTTGTTTTGTTTTTTAAATAAACTGCATTGAGATCCAACAAACTGGATTGTTATAAAAAATCAA
TAAAAGAATCTTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAA
nt 1 - nt 2423 of BC058198.1
Notes:Submitter information: The probe was made from the entire insert sequence of the IMAGE:5353871 clone.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:ICR
Age:9.0 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + BMpurple
General Information
Authors:Owen J. Tamplin, Doris Kinzel, Brian J Cox, Christine E. Bell, Janet Rossant and Heiko Lickert.
Principal investigator:Heiko Lickert, Institute of Stem Cell Research, Helmholtz Zentrum M�nchen German Research Center for Environmental Health (GmbH) Ingolst�dter Landstra�e 1, Neuherberg, Germany D-85764
Submitted by:Owen J Tamplin, The Hospital for Sick Children Research Institute, Rossant Lab Room 13-305 Developmental and Stem Cell Biology Program Toronto Medical Discovery Tower 101 College Street, Toronto, Canada M5G 1L7
Experiment type:screen
References:[ doi:10.1186/1471-2164-9-511] [ PMID:18973680] Tamplin OJ, Kinzel D, Cox BJ, Bell CE, Rossant J, Lickert H 0 Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics (9):511
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE