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EMAGE:5777

Hmga2 high mobility group AT-hook 2 ( MGI:101761)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5777
Figure 3E IV. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2006.04.003] Gene Expr Patterns 6: 992-999, Lord-Grignon J; Abdouh M; Bernier G, "Identification of genes expressed in retinal progenitor/stem cell colonies isolated from the ocular ciliary body of adult mice." Copyright 2006. [PMID:16765103]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5777Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5777_wholemount__moderate.wlz
5777_wholemount__weak.wlz
5777_wholemount__notDetected.wlz
5777_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5777_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trunk somite
strong strong
Expressed most predominantly in the somites, tail bud, and telencephalic vesicles.
heart
detected detected
telencephalon
strong strong
regionalExpressed most predominantly in the somites, tail bud, and telencephalic vesicles.
tail
strong strong
Expressed most predominantly in the somites, tail bud, and telencephalic vesicles.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Hmga2 probeA
Entity Detected:Hmga2, high mobility group AT-hook 2 ( MGI:101761)
Notes:The Hmga2 probe used in this study by Lord-Grignon et al., 2006 [PMID:16765103] was transcribed from "EST clone 206", which was "isolated from the 72 h PSC (pigmented sphere colonies) library". Editors note: Further information in Supplementary Table 1 therein lists NM_010441 as a sequence identifier for this gene, however NM_010441 refers to a 4.2kb full-length cDNA sequence and is unlikely to represent the sequence of the EST clone 206.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Lord-Grignon J; Abdouh M; Bernier G, 2006 [PMID:16765103] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2006.04.003] [ PMID:16765103] Lord-Grignon J, Abdouh M, Bernier G 2006 Identification of genes expressed in retinal progenitor/stem cell colonies isolated from the ocular ciliary body of adult mice. Gene Expr Patterns (6):992-9
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE