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EMAGE:5819

Foxd1 forkhead box D1 ( MGI:1347463)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5819
Fig3M. from [doi:10.1101/gad.1190304] Genes Dev 2004 18(8): 937-51, Jeong J; Mao J; Tenzen T; Kottmann AH; McMahon AP, Hedgehog signaling in the neural crest cells regulates the patterning and growth of facial primordia. Copyright 2004 [PMID:15107405]

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5819Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5819_wholemount__moderate.wlz
5819_wholemount__weak.wlz
5819_wholemount__notDetected.wlz
5819_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5819_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
fronto-nasal process
detected detected
branchial arch
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Foxd1 probeA
Entity Detected:Foxd1, forkhead box D1 ( MGI:1347463)
Notes:The Foxd1 probe used in this study by Jeong et al., 2004 [PMID:15107405] is of unreported sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Jeong J; Mao J; Tenzen T; Kottmann AH; McMahon AP, 2004 [PMID:15107405] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1101/gad.1190304] [ PMID:15107405] Jeong J, Mao J, Tenzen T, Kottmann AH, McMahon AP 2004 Hedgehog signaling in the neural crest cells regulates the patterning and growth of facial primordia. Genes Dev (18):937-51
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE