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EMAGE:585

Hand1 heart and neural crest derivatives expressed transcript 1 ( MGI:103577)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:585
Figure 6H of Roebroek et al., 1998 [PMID:9811571] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Abbreviations used: a, common atrial chamber; bw, body wall; da, dorsal aorta; hg, hindgut; lv, left ventricle; rv, right ventricle; uv, umbilical vein; va, vitelline artery. Open arrow points to cells of the rudimentary left ventricle.
Expression Pattern Description
Spatial Annotation:
EMAGE:585EMAGE:585Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
585_voxel_strong_3D_1.wlz
585_voxel_moderate_3D_1.wlz
585_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:585_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
heart
detected detected
regionalCardiac expression is restricted to the future left ventricle (open arrow).
vitelline artery
detected detected
regional
umbilical vein embryonic part
detected detected
regional
trunk mesenchyme
detected detected
regional
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:25912
Entity Detected:Hand1, heart and neural crest derivatives expressed transcript 1 ( MGI:103577)
Sequence:sense strand is shown

>MGI:25912
GCCACCCCCTTCCCTCCTCCTGCCATTGGCTCCGGCTAGAGGTTGACATCAAAGCCGAGGCCTTATATAA
GCAGGATCCTGGTGGCAAGTCCGCAGAAGGGTTAAACCCGGTCTTTGGACGTCTGAACCCTTCTCCCTCG
TTGCCTACAGAAACCTTCAAGAGGTCGGCAGGTCCTTCGTGTCATCTCCAGCCTTGCTCGCTCAGGACTC
TCCAAACCCCAGCCAGTTCGCTGCCTCTGGAGCCCACGGTGACCCCCTTCTGTGGGGCGCATGGGGCGGT
GCTAATTGGGCTGACAGCACAGGCCAGGAGCCTCTCCAACATGAACCTCGTGGGCAGCTACGCACATCAT
CACCATCATCACCACTCACACCCGCCGCACCCCATGCTCCACGAACCCTTCCTGTTTGGCCCGGCCTCGC
GTTGCCACCAGGAGCGGCCTTACTTCCAGAGCTGGCTGCTGAGCCCGGCTGATGCTGCCCCAGATTTCCC
TGCCGGCGGGCCACCACCTACCACCGCAGTAGCAGCGGCTGCCTATGGTCCCGATGCCAGGCCGAGTCAG
AGCCCAGGTCGGCTGGAGGCTCTTGGAAGCCGCCTGCCCAAACGAAAAGGCTCAGGACCCAAGAAGGAGA
GGAGACGCACAGAGAGCATTAACAGCGCGTTCGCGGAGCTGCGTGAGTGCATCCCCAATGTGCCCGCCGA
CACCAAGCTCTCCAAGATCAAGACTCTGCGCCTGGCTACCAGTTACATCGCCTACTTGATGGACGTGCTG
GCCAAGGATGCACAAGCAGGTGACCCCGAGGCCTTCAAGGCTGAACTCAAAAAGACGGATGGCGGTCGCG
AAAGCAAGCGGAAAAGGGAGTTGCCTCAGCAGCCCGAAAGCTTCCCTCCTGCCTCGGGGCCCGGCGAGAA
GAGGATTAAAGGGCGCACCGGCTGGCCTCAGCAAGTCTGGGCGCTGGAGCTAAACCAGTGAGACCAGGCC
AACGCCGCCGGAGAACCCGGCCGAGGCTGGCCCACCTGGCTACGCGGAGAGGAGAGGAAAGGACGCAGCG
GCTACGGCGGGTCTCCCGGTGCCCGCGCGCATTTCGCCCAGTCTCTGCGGAGCACCGGAGGGTCGGCGGT
TGCAACTACCCACTAGGATCGCACGTGCAATGTCATTTGAATTTGTTAATACATAAGAGAAAGAGAAATT
TATATATATGTTCACTTCCCGCCGAGGGCGGCTCTTGAAGGCTCGACTCAAGGTGGGACTGGAGAAGACC
AAGCCCCCGAAGACACACCCTTCCAACCCATCTGGGTGGAACTCAACCCCAAAAGCCATGGTCGCGCCGC
TCTCTGGCTCGCTCTCTCGTCCCCTTCTTGGCTCTGCGTCAGTACCCTGATGCCTTCTCGAGTTAAAATG
CAATAAGAGTAATTGGTAGTTTCTAACCAGGAAGACTGACGCTGCCTGGGTTGACCTCTCCTGAGCAGCG
ATGGTTTTCCTTCTTGTCGCTACACTTCCTACCTAGAGGGAAGGCGTTGCTCCCTTGCGCAGCACCTCTG
CTTTCCAAGGGAAATCTTTCCCTTCCTTTCCCTTCCCTTCCCTCCCCTCTCCTCCTCCTTTCCCCTCTTC
CGTCCTCTTACCTCCTCTTTCTCTTCCTTCCTTCTTCTTCATTTCTTTCCTTTTCCTTCTAAATAAAAGC
GTTCCCATTCGTTGCTGAATTTGTAACGTATTTAAACTACCTATCATGCCTGTTGCTCTCAGGTATACAT
CTCCCTACCCCCACCCTCTTTCTACCTCAAATCAGTGTGACCACTCGCAGCCCCACCCTTTGCCAAAGCA
GTATCTATGCTCTTGACTTAATAAAAAGTTTTCAGAG
nt 42 - nt 1898 of NM_008213.1
Notes:The Hand1 (eHand) probe used in this study by Roebroek et al., 1998 [PMID:9811571] is indicated as that used by Biben & Harvey, 1997 [PMID:9192865] who describe the probe as the "full-length" cDNA used by Cserjesi et al., 1995 [PMID:7649392] (see Fig 1A therein for sequence).
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount plus section of wholemount
Procedures
Embedding:paraffin
General Information
Authors:Roebroek et al., 1998 [PMID:9811571] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9811571] Roebroek AJ, Umans L, Pauli IG, Robertson EJ, van Leuven F, Van de Ven WJ, Constam DB 1998 Failure of ventral closure and axial rotation in embryos lacking the proprotein convertase Furin. Development (125):4863-76
 [ doi:10.1101/gad.11.11.1357] [ PMID:9192865] Biben C, Harvey RP 1997 Homeodomain factor Nkx2-5 controls left/right asymmetric expression of bHLH gene eHand during murine heart development. Genes Dev (11):1357-69
 [ doi:10.1006/dbio.1995.1245] [ PMID:7649392] Cserjesi P, Brown D, Lyons GE, Olson EN 1995 Expression of the novel basic helix-loop-helix gene eHAND in neural crest derivatives and extraembryonic membranes during mouse development. Dev Biol (170):664-78
Links:MGI:1331449 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI