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EMAGE:5862

Gja1 gap junction protein, alpha 1 ( MGI:95713)
TS16 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5862 EMAGE:5862 EMAGE:5862
Fig2A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2005.01.030] Dev Biol 281(2): 145-59, Haines BP; Gupta R; Michael Jones C; Summerbell D; Rigby PW. The NLRR gene family and mouse development: Modified differential display PCR identifies NLRR-1 as a gene expressed in early somitic myoblasts. Copyright 2005 [PMID:15893969] Fig2Ai. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2005.01.030] Dev Biol 281(2): 145-59, Haines BP; Gupta R; Michael Jones C; Summerbell D; Rigby PW. The NLRR gene family and mouse development: Modified differential display PCR identifies NLRR-1 as a gene expressed in early somitic myoblasts. Copyright 2005 [PMID:15893969] Fig2Aii. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2005.01.030] Dev Biol 281(2): 145-59, Haines BP; Gupta R; Michael Jones C; Summerbell D; Rigby PW. The NLRR gene family and mouse development: Modified differential display PCR identifies NLRR-1 as a gene expressed in early somitic myoblasts. Copyright 2005 [PMID:15893969]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: i and ii are sections of the embryos in A. The plane of section is indicated by white lines, nt-neural tube, psm-presomitic mesoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:5862Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5862_wholemount__moderate.wlz
5862_wholemount__weak.wlz
5862_wholemount__notDetected.wlz
5862_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5862_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
tail unsegmented mesenchyme
detected detected
Cx43 is expressed throughout the presomitic mesoderm. This expression restricts to the tail bud as the embryo develops.
tail
detected detected
regionalExpression restricts to the tail bud as the embryo develops.
limb
detected detected
embryo
detected detected
regionalExpression is detected in neural crest cells.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Gja1 probeA
Entity Detected:Gja1, gap junction protein, alpha 1 ( MGI:95713)
Notes:The Gja1 (connexin43) probe used in this study by Haines et al., 2005 [PMID:15893969] was transcribed from a differential display PCR fragment, which was generated using an arbitrary 24mer (5'-GATTGTCGGGATCCGATCTGACAC). The template clone is of unreported sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6 x CBA
Age:9.5 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Haines BP; Gupta R; Michael Jones C; Summerbell D; Rigby PW, 2005 [PMID:15893969] , Indexed and Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.ydbio.2005.01.030] [ PMID:15893969] Haines BP, Gupta R, Jones CM, Summerbell D, Rigby PW 2005 The NLRR gene family and mouse development: Modified differential display PCR identifies NLRR-1 as a gene expressed in early somitic myoblasts. Dev Biol (281):145-59
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE