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EMAGE:5891

Fam3b family with sequence similarity 3, member B ( MGI:1270150)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5891
Figure 90-c21orf11e10.5. [doi:10.1038/nature01178] Reymond A; Marigo V; Yaylaoglu MB; Leoni A; Ucla C; Scamuffa N; Caccioppoli C; Dermitzakis ET; Lyle R; Banfi S; Eichele G; Antonarakis SE; Ballabio A, "Human chromosome 21 gene expression atlas in the mouse." Nature 2002;420: 582-6. [PMID:12466854] © Nature Publishing Group. Reproduced with permission from Nature.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5891Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5891_wholemount__possible.wlz
5891_wholemount__notDetected.wlz
5891_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5891_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
brain
detected detected
future spinal cord
not detected not detected
homogeneous
eye
detected detected
otocyst
not detected not detected
homogeneous
dorsal root ganglion
not detected not detected
homogeneous
branchial arch
detected detected
heart
detected detected
gut
not detected not detected
homogeneous
limb
not detected not detected
homogeneous
mesonephros
not detected not detected
homogeneous
surface ectoderm
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:951508
Entity Detected:Fam3b, family with sequence similarity 3, member B ( MGI:1270150)
Sequence:sense strand is shown

>MGI:951508
AAGAGGGATAAACATTGCTGTCGTCAACTATGANACAGGAAAAGTGATAGCGACAAAGTACTTTGATATG
TATGAAGGTGATAACTCCGGGCCAATGGCCAAGTTCATTCAGAGCACTCCTTCAAAATCCCTGCTGTTCA
TGGTGACTCATGATGATGGAAGTTCCAAACTGAAGGCTCAAGCAAAGGATGCCATAGAAGCCCTTGGAAG
CAAAGAAATCAAGAACATGAAGTTCAGATCAAGCTGGGTGTTTGTTGCAGCNAAGGGCTTTGAGCTCCCT
TCAGAAATCGAGAGAGAAAAAATCNACCACTCAGATCAATCCAGGAACAGATATGCNGGCTGGCCAGCGG
AGATCCAGATCGAAGGATGCATACCCAAAGGGCTGAGATAACGGTGCTTGGACCTCAATAAACACGNTTT
GTACAGATATACT
Notes:The Fam3b probe used in this study by Reymond et al., 2002 [PMID:12466854] was generated from IMAGE:1546160.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Reymond A; Marigo V; Yaylaoglu MB; Leoni A; Ucla C; Scamuffa N; Caccioppoli C; Dermitzakis ET; Lyle R; Banfi S; Eichele G; Antonarakis SE; Ballabio A, 2002 [PMID:12466854] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1038/nature01178] [ PMID:12466854] Reymond A, Marigo V, Yaylaoglu MB, Leoni A, Ucla C, Scamuffa N, Caccioppoli C, Dermitzakis ET, Lyle R, Banfi S, Eichele G, Antonarakis SE, Ballabio A 2002 Human chromosome 21 gene expression atlas in the mouse. Nature (420):582-6
Links:MGI:2666335 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI