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EMAGE:5897

Ntn3 netrin 3 ( MGI:1341188)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5897
Figure 2B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00035-0] Mech Dev 83: 65-75, Puschel AW "Divergent properties of mouse netrins. " Copyright 1999. [PMID:10381568]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: arrowhead, distal limb bud; arrow, dorsal root ganglia.
Expression Pattern Description
Spatial Annotation:
EMAGE:5897Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5897_wholemount__weak.wlz
5897_wholemount__notDetected.wlz
5897_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5897_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
limb
detected detected
regionalExpressed in distal limb buds.
dorsal root ganglion
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Ntn3 probeA
Entity Detected:Ntn3, netrin 3 ( MGI:1341188)
Sequence:sense strand is shown

>Ntn3 probeA
CAAGACTGGGTGACTGCCACAGATATTCGCATAGTACTCACAAGGCCTGCCATTCAGGGAGACACCAGGG
ACGGTGGGGTGACAGTCCCCTACTCCTACTCAGCCACTGAGCTTCAGGTGGGAGGTCGATGCAAGTGCAA
TGGGCATGCCTCACGGTGTCTGTTGGACACCCATGGCCACCTGGTCTGCGACTGCCAGCATGGTACAGAG
GGCCCTGATTGCAGCCGCTGCAAGCCCTTCTACTGCGACAGGCCATGGCAGCGGGCTACAGGGCAGGAAG
CCCACGCTTGCCTTGCTTGCTCCTGCAACGGCCATGCGCGAAGATGCCGCTTCAACATGGAGCTCTACCG
ACTGTCCGGCCGCCGCAGTGGGGGCGTGTGCCTCAACTGCCGGCACAATACAGCTGGTCGTCACTGCCAC
TACTGCCGGGAGGGCTTCTATCGTGATCCAGGCCGTGTCCTGAGTGACCGTCGTGGTTGCAGAGCTTGTG
ACTGCCACCCAGTTGGTGCTGCTGGCAAAACCTGTAACCAGACCACAGGCCAGTGTCCCTGTAAGGATGG
TGTTACTGGCCTCACCTGTAACCGCTGTGCCCCAGGTTTCCAGCAGAGCCGTTCTCCTGTGGCACCTTGC
GTTAAGACTCCTGTCCCTGGACCCACCGAAGAAAGCAGTCCTGTGGAGCCACAGGACTGTGAGTCACATT
GCAGACCTGCGCGTGGCAGTTACCGAATCAGCCTGAAGAAGTTCTGCCGGAAGGACTATGCGGTGCAGGT
GGCAGTGGGTGCACGCGGTGAGGCCCGCGGCTCGTGGACACGCTTTCCGGTAGCGGTGCTTGCTGTGTTC
CGCAGCGGCGAGGAACGCGCTCGACGCGGGAGCAGCGCGCTGTGGGTACCAA
nt 875 - nt 1766 of AF128866.1
Notes:The Ntn3 probe used in this study by Puschel, 1999 [PMID:10381568] was a "1.1 kb cDNA fragment for netrin-3 (corresponding to sequences coding for amino acids 211-508)". Editors note: The accession number for the netrin-3 cDNA sequence referred to by Puschel is AF128866.1.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Puschel AW, 1999 [PMID:10381568] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1016/S0925-4773(99)00035-0] [ PMID:10381568] P�schel AW 1999 Divergent properties of mouse netrins. Mech Dev (1999):65-75
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE