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EMAGE:5905

S1pr4 sphingosine-1-phosphate receptor 4 ( MGI:1333809)
TS18 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5905
Figure 3I. [doi:10.1002/dvdy.21736] Copyright. This image is from Ohuchi H; Hamada A; Matsuda H; Takagi A; Tanaka M; Aoki J; Arai H; Noji S, "Expression patterns of the lysophospholipid receptor genes during mouse early development." Dev Dyn 2008; 237: 3280-94. Reprinted with permission of Wiley-Liss Inc. [PMID:18924241] .

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5905Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5905_wholemount__moderate.wlz
5905_wholemount__weak.wlz
5905_wholemount__possible.wlz
5905_wholemount__notDetected.wlz
5905_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5905_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
Ubiquitously expressed.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:S1pr4 probeA
Entity Detected:S1pr4, sphingosine-1-phosphate receptor 4 ( MGI:1333809)
Sequence:sense strand is shown

>S1pr4 probeA
GGCTACTGGCAGCTATCCTGGGCCTGCTGCCCCTGCTGGGCTGGAACTGTGTGTGCGCCTTCCCACGCTG
CTCCAGCCTGCTGCCCCTCTACTCCAAGGGCTATGTGCTCTTTTGTGTGGTGGTCTTCGCCCTCATCCTA
GTGGCTATCCTGAGCCTCTACGGGGCCATCTTTAGAGTGGTCCGAGCCAATGGGCAGAAGTCTCCACGTC
CTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTTTGTGGTGTG
CTGGGGTCCCCTGTTTGGCCTGCTCCTGGCTGACATCTTTGGTTCTAATGTCTGGGCCCAGGAGTACCTG
CGTGGCATGGACTGGATCCTGGCCCTGGCCGTGTTCAACTCAGCCATTAATCCTCTCATCTACTCCTTCC
GCAGCCGTGAGGTGCAGCGCGCTGTGCTGGCCTTCCTGTGCTGCGGCTGTCTCTGGCTAGGTCTGCGAGG
TCCAGGAGACTGCCTGACCCGGATCACCGAGGCCCACTCCGGTGCATCCACCACTGACAGCTCCCTGAGG
CCCAGGGACAGTTTTCGGACTTCTCGGTCACTCAGCTTCAGGATGAGAGAGCCGCTGTCCAGCATTTCCA
GCGTCCGCAGCACCTAGAGCTTGGACCAGCCAGTTGCCCACTGAGCAGGCCCTCCCAGACGAGGTGAGAA
GGGACAGGACACAAGAACCTTGCCTGATGGTGACTGAGAACATGACAGCAAGCCCCGGGTTCCTTCCACA
AAATTCCCCGTGATGAATGTTTGGCAGAGAGTGGCTGGAGCCAGAGCCAGTGAGTCTGGGCCTTGAAGGG
CCCCTCCCCCCCGCCCAGGCAGCAAAGGGGATGTGCCATGTCCGAGGCCATGGACAGGACAGAGCTTTGT
GGTTCTGTCTTAGTCACATGTGTTCAGGTCAATGCCCAGGCTACTGTAATGTGTCTCCTGGTCATACCCA
CTGGTATACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCATTTGTTTGAGGGCAACT
nt 537 - nt 1584 of AK154242.1
Notes:The S1pr4 (S1p4) probe used in this study by Ohuchi et al., 2008 [PMID:18924241] was generated by PCR using the primers 5'-GGCTACTGGCAGCTATCCTG-3' (left) and 5'-AGTTGCCCTCAAACAAATGG-3' (right) and a template cDNA obtained from DNABook (DNAFORM). The probe transcribed from it is 1048nt in length and AK154242 is given as an identifier.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Ohuchi H; Hamada A; Matsuda H; Takagi A; Tanaka M; Aoki J; Arai H; Noji S, 2008 [PMID:18924241] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1002/dvdy.21736] [ PMID:18924241] Ohuchi H, Hamada A, Matsuda H, Takagi A, Tanaka M, Aoki J, Arai H, Noji S 2008 Expression patterns of the lysophospholipid receptor genes during mouse early development. Dev Dyn (237):3280-94
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE