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EMAGE:5907

S1pr1 sphingosine-1-phosphate receptor 1 ( MGI:1096355)
TS16 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5907
Figure 3F. [doi:10.1002/dvdy.21736] Copyright. This image is from Ohuchi H; Hamada A; Matsuda H; Takagi A; Tanaka M; Aoki J; Arai H; Noji S, "Expression patterns of the lysophospholipid receptor genes during mouse early development." Dev Dyn 2008; 237: 3280-94. Reprinted with permission of Wiley-Liss Inc. [PMID:18924241] .

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: te - telencephalon, he - heart.
Expression Pattern Description
Spatial Annotation:
EMAGE:5907Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5907_wholemount__moderate.wlz
5907_wholemount__possible.wlz
5907_wholemount__notDetected.wlz
5907_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5907_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
heart
detected detected
cardiovascular system
detected detected
regionalExpressed in the developing blood vessels of the head and body, the intersegmental vessels and heart.
branchial arch
detected detected
future forebrain
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:S1pr1 probeA
Entity Detected:S1pr1, sphingosine-1-phosphate receptor 1 ( MGI:1096355)
Sequence:sense strand is shown

>S1pr1 probeA
CACAGGCAAGTTGAACATCGGGGCGGAGAAGGACCATGGCATTAAACTGACTTCAGTGGTGTTCATTCTC
ATCTGCTGCTTCATCATCCTAGAGAATATATTTGTCTTGCTAACTATTTGGAAAACCAAGAAGTTCCACC
GGCCCATGTACTATTTCATAGGCAACCTAGCCCTCTCGGACCTATTAGCAGGCGTGGCTTACACAGCTAA
CCTGCTGTTGTCTGGGGCCACCACTTACAAGCTCACACCTGCCCAGTGGTTTCTGCGGGAAGGGAGTATG
TTTGTGGCTCTCTCTGCATCAGTCTTCAGCCTCCTTGCCATCGCCATTGAGCGCTACATCACCATGCTGA
AGATGAAACTACACAACGGGAGCAACAGCTCGCGCTCCTTTCTGCTGATCAGCGCCTGCTGGGTCATCTC
CCTCATCCTGGGGGGCCTGCCCATCATGGGCTGGAACTGCATCAGCTCGCTGTCTAGCTGCTCCACCGTG
CTCCCGCTCTACCACAAGCACTATATTCTCTTCTGCACCACCGTCTTCACTCTGCTCCTGCTTTCCATCG
TCATCCTCTACTGCAGGATCTACTCCTTGGTCAGGACTCGAAGCCGCCGCCTGACCTTCCGCAAGAACAT
CTCCAAGGCCAGTCGCAGTTCTGAGAAGTCTCTGGCCTTGCTGAAGACGGTGATCATTGTCCTGAGTGTC
TTCATTGCCTGCTGGGCCCCTCTCTTCATCCTACTACTGTTAGATGTGGGCTGCAAGGCGAAGACCTGTG
ACATCCTGTACAAAGCAGAGTACTTCCTGGTTCTGGCTGTGCTGAACTCAGGTACCAACCCCATCATCTA
CACTCTGACCAACAAGGAGATGCGCCGGGCCTTCATCCGGATCGTATCTTGTTGCAAATGCCCCAACGGA
GACTCTGCTGGCAAATTCAAGAGGCCCATCATCCCAGGCATGGAATTTAGCCGCAGCAAATCAGACAACT
CCTCTCAC
nt 604 - nt 1591 of AK004591.2
Notes:The S1pr1 (S1p1) probe used in this study by Ohuchi et al., 2008 [PMID:18924241] was generated by PCR using the primers 5'-CACAGGCAAGTTGAACATCG3-3' (left) and 5'-GTGAGAGGAGTTGTCTG-3' (right) and a template cDNA obtained from FANTOM (DNAFORM). The probe transcribed from it is 988nt in length. AK004591 is given as an identifier.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Ohuchi H; Hamada A; Matsuda H; Takagi A; Tanaka M; Aoki J; Arai H; Noji S, 2008 [PMID:18924241] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1002/dvdy.21736] [ PMID:18924241] Ohuchi H, Hamada A, Matsuda H, Takagi A, Tanaka M, Aoki J, Arai H, Noji S 2008 Expression patterns of the lysophospholipid receptor genes during mouse early development. Dev Dyn (237):3280-94
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE