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EMAGE:5918

Shisa3 shisa homolog 3 (Xenopus laevis) ( MGI:3041225)
TS16 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:5918
Figure 4D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.ydbio.2007.03.028] Dev Biol 2007; 306: 480-92, Furushima K; Yamamoto A; Nagano T; Shibata M; Miyachi H; Abe T; Ohshima N; Kiyonari H; Aizawa S, "Mouse homologues of Shisa antagonistic to Wnt and Fgf signalings." Copyright 2007 [PMID:17481602]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: arrows show enclave like expression in ventral mesencephalon and rhombencephalon.
Expression Pattern Description
Spatial Annotation:
EMAGE:5918Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5918_wholemount__moderate.wlz
5918_wholemount__weak.wlz
5918_wholemount__possible.wlz
5918_wholemount__notDetected.wlz
5918_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5918_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
foregut
detected detected
nephric duct
detected detected
trunk somite
detected detected
regionalExpression was detected in the ventral portion of somites.
future midbrain
detected detected
regionalExclave like expression was found in ventral mesencephalon.
future hindbrain
detected detected
regionalExclave like expression was found in ventral rhombencephalon.
hepatic primordium
detected detected
tail somite
detected detected
Expression was detected in the ventral portion of somites.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3777005
Entity Detected:Shisa3, shisa homolog 3 (Xenopus laevis) ( MGI:3041225)
Notes:The Shisa3 probe used in this study by Furushima et al., 2007 [PMID:17481602] was "was a partial cDNA", "obtained from the FANTOM II library Okazaki et al., 2001 [PMID:12466851] ". It is of unreported sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Furushima K; Yamamoto A; Nagano T; Shibata M; Miyachi H; Abe T; Ohshima N; Kiyonari H; Aizawa S, 2007 [PMID:17481602] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.ydbio.2007.03.028] [ PMID:17481602] Furushima K, Yamamoto A, Nagano T, Shibata M, Miyachi H, Abe T, Ohshima N, Kiyonari H, Aizawa S 2007 Mouse homologues of Shisa antagonistic to Wnt and Fgf signalings. Dev Biol (306):480-92
 [ doi:10.1038/nature01266] [ PMID:12466851] Okazaki Y, et al 2002 Analysis of the mouse transcriptome based on functional annotation of 60770 full-length cDNAs. Nature (2002):563-73
Links:MGI:3777762 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI