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EMAGE:593

Snai1 snail homolog 1 (Drosophila) ( MGI:98330)
TS12 (7 Somite no.)
in situ hybridisation

Data Images
EMAGE:593 EMAGE:593
Fig 6a Smith et al., 1992 [PMID:1295727] Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright Fig 6c Smith et al., 1992 [PMID:1295727] Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: g, foregut; h, neural epithelium of the caudal hindbrain. Arrow points to neural crest delaminating from the lateral edge of the hindbrain neuroepithelium.
Expression Pattern Description
Spatial Annotation:
EMAGE:593EMAGE:593Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
593_voxel_strong_3D_1.wlz
593_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:593_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
head mesenchyme
detected detected
Transcripts in all cephalic mesenchyme
head mesenchyme derived from neural crest
detected detected
regionalExpression in neural crest cells delaminating from the lateral edge of the hindbrain epithelium
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1336665
Entity Detected:Snai1, snail homolog 1 (Drosophila) ( MGI:98330)
Sequence:sense strand is shown

>MGI:1336665
AGGCCTGTGCCCGAACCTTCTCCCGCATGTCCTTGCTCCACAAGCACCAAGAGTCTGGCTGCTCCGGAGG
CCCTCGCTGACCCTGCTACCTCCCCATCCTCGCTGGCATCTTCCCGGAGCTCACCCTCCTCCTCACTGCC
AGGACTCCTTCCAGCCTTGGTCCGGGGACCTGTGGCGTCCATGTCTGGACCTGGTTCCTGCTTGGCTCTC
TTGGTGGCCTTTGCCGCAGGTGGCTGATGGAGTGCCTTTGTACCCGCCCAGAGCCTCCTACCCCTCAGTA
TTCATGAGGTGTAGCCTCTGGACACAGCTGCTTCGAGCCATAGAACTAAAGCCAACCCACTGGCTGGGAA
GCTTGAACCCCGCTCAGGGACCCCACTTCCCTACCTCCCTCAAGGACCCTTCAGGCCACCTTCTTTGAGG
TACAACAGACTATGCAATAGTTCCCCTCCCCCCCACCCCGTCCAGCTGTAA
nt 730 - nt 1200 of M95604.1
Notes:The Snai1 probe used in this study by Smith ey al., 1992 [PMID:1295727] was described as "including nucleotides 730 to 1200 of the Sna cDNA." The cDNA clone refered to appears in Fig 1 therein and was deposited in GenBank/EMBL/DDBJ as M95604.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Strain:C57BL/6
Age:7 Somite no.
Theiler Stage:TS12
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Smith et al., 1992 [PMID:1295727] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:1295727] Smith DE, Franco del Amo F, Gridley T 1992 Isolation of Sna, a mouse gene homologous to the Drosophila genes snail and escargot: its expression pattern suggests multiple roles during postimplantation development. Development (116):1033-9
Links:MGI:2153809 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI