EMAGE mouse gene expression spatial database

EMAGE:5939

Lingo4 leucine rich repeat and Ig domain containing 4 ( MGI:2444651)
TS17 (10.5 dpc)
in situ hybridisation

Data Images


Figure 5B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2007.10.003] Gene Expr Patterns 2008; 8: 79-86 Haines BP; Rigby PW, "Expression of the Lingo/LERN gene family during mouse embryogenesis." Copyright 2008. [PMID:18297755]	Figure 5C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2007.10.003] Gene Expr Patterns 2008; 8: 79-86 Haines BP; Rigby PW, "Expression of the Lingo/LERN gene family during mouse embryogenesis." Copyright 2008. [PMID:18297755]	Figure 5D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2007.10.003] Gene Expr Patterns 2008; 8: 79-86 Haines BP; Rigby PW, "Expression of the Lingo/LERN gene family during mouse embryogenesis." Copyright 2008. [PMID:18297755]

Expression pattern clarity:
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Notes:

Note: Neural tube (nt). In B the approximate planes of sections C and D are shown.

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

wholemount mapping

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Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

neural tube lateral wall

detected

regional

Expression is restricted to a subset of neural progenitors either side of the midline of the ventral neural tube adjacent to the motor horn.

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	MGI:3789344
Entity Detected:	Lingo4, leucine rich repeat and Ig domain containing 4 ( MGI:2444651)
Sequence:	sense strand is shown >MGI:3789344 ACTGCAGTGGCTTGTGACAGTCAGGAAGGTGGTGGAGGCTCCTGCAGGCAGAGGCCACACTCCCCTGCAT GCACTGGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAGGGCACTGGCTGGATTGGGTACCGGGTAGCA GAAAAGAACGGGAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCT GGAGATGCTTCTCAGCTCCACTTCTGAAACAATCTTGTGGTTGTGTTTGGCACCTGGTCCTGGCTATTAG AGGATATACAGACATGGAGAGCAGACCGGAGCCTTGTCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGG GATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTGGGTCCCTCAGAGAAGATGCAGCAA TGCCATGCTCAGACTAGAGCAGCAATCATAATGCAGGCGACAGGTGTGGGAAGGCTGTGCTGTTTGGCAT GAAGCTGTGGTTCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTCTTTA GCATGGATGGAAAAGTCAGAATAACTTGGCAGTGACCCG
	nt 132465 - nt 133063 of AC122808.3
Notes:	The Lingo4 probe used in this study by Haines & Rigby, 2008 [PMID:18297755] "was obtained by PCR with Pfu polymerase (Stratagene) using primers 5'-CGGGTCACTGCCAAGTTATT and 5'-ACTGCAGTGGCTTGTGACAG from the BAC RP23-298M23 which contains the Lingo4/LERN4 gene. The PCR product was cloned into EcoRV digested pBluescript II KS yielding the plasmid LERN4 RT1. Antisense riboprobes were generated by digesting LERN4 RT1 with HindIII and transcribing with T7 RNA polymerase.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Procedures

General Information

Authors:	Haines BP & Rigby PW, 2008 [PMID:18297755] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/j.modgep.2007.10.003] [ PMID:18297755] Haines BP, Rigby PW 2008 Expression of the Lingo/LERN gene family during mouse embryogenesis. Gene Expr Patterns (8):79-86
Links:	MGI:3789601 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source