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EMAGE:6001

Sorcs1 VPS10 domain receptor protein SORCS 1 ( MGI:1929666)
TS18 (11.5 dpc)
in situ hybridisation

Data Images
EMAGE:6001
Figure 1B. Hermey G; Schaller HC; Hermans-Borgmeyer I, "Transient expression of SorCS in developing telencephalic and mesencephalic structures of the mouse." Neuroreport 2001 Jan 22;12(1):29-32. [PMID:11201086]

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:6001Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
6001_wholemount__moderate.wlz
6001_wholemount__possible.wlz
6001_wholemount__notDetected.wlz
6001_wholemount__strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:6001_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
brain
detected detected
homogeneousTranscripts were distributed nearly evenly throughout the brain.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:Sorcs1 probeA
Entity Detected:Sorcs1, VPS10 domain receptor protein SORCS 1 ( MGI:1929666)
Sequence:sense strand is shown

>Sorcs1 probeA
CACTCTCATGGTGCAGCTGGAAGAGGGTGATGTGCAGCGGACACTCATCCAAGTGGACTTCGGAGATGGC
ATTGCAGTATCGTATGTCAACCTCAGCTCTATGGAAGACGGTATCAAGCACGTATATCAGAATGTGGGCA
TTTTCCGAGTGACCGTGCAGGTGGACAACAGTCTGGGGTCTGACAGCGCCGTCCTGTACTTACATGTAAC
TTGTCCCCTGGAGCATGTGCACCTGTCTCTTCCTTTTGTCACAACAAAGAACAAAGAGGTCAATGCAACT
GCAGTGCTTTGGCCCAGCCAAGTGGGCACTCTCACTTACGTGTGGTGGTATGGGAACAACACAGAGCCCC
TGATCACCTTGGAGGGAAGCATATCGTTCAAGTTTACTTCTGAAGGAATGAATACTATCACAGTCCAAGT
CTCTGCTGGGAACGCCATACTGCAAGACACAAAGACCATTGCGGTATATGAGGAATTTCGGTCTCTTCGC
TTGGCCTTTTCTCCGAACTTGGATGACTACAACCCTGACATCCCGGAGTGGAGGAGGGACATCAGCCGAG
TCATCAAAAAGTCTCTGGTGGAAGCCACAGGGATTCCCAGCCAGCATATCCTGGTGGCGGTGTTACCTGG
CTTACCCACTGCTGCAGAGCTCTTTGTTTTGCCCTACCAAGATGGAACCAGGGAAAACAAAAGGTCGCCT
G
nt 2465 - nt 3165 of AF195056.1
Notes:The Sorcs1 probe template used in this study by Hermey et al., 2001 [PMID:11201086] to generate digoxigenin probes covered "nucleotides 2465-3165 (GenBank accession number AF195056)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:11.5 dpc
Theiler Stage:TS18
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Hermey G; Schaller HC; Hermans-Borgmeyer I, 2001 [PMID:11201086] . Indexed and spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1097/00001756-200101220-00014] [ PMID:11201086] Hermey G, Schaller HC, Hermans-Borgmeyer I 2001 Transient expression of SorCS in developing telencephalic and mesencephalic structures of the mouse. Neuroreport (12):29-32
Links: Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE