Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:61

Pax1 paired box gene 1 ( MGI:97485)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:61
Figure 2P of Akasaka et al., 2001 [PMID:11290297] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:61Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
61_wholemount_strong_3D_1.wlz
61_wholemount_moderate_3D_1.wlz
61_wholemount_possible_3D_1.wlz
61_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:61_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial pouch endoderm
moderate moderate
2nd branchial pouch endoderm
moderate moderate
trunk somite
moderate moderate
sclerotome
3rd branchial pouch endoderm
moderate moderate
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1932905
Entity Detected:Pax1, paired box gene 1 ( MGI:97485)
Notes:Probe used in this study by Akasaka et al., 2001 [PMID:11290297] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + undefined
General Information
Authors:Akasaka et al., 2001 [PMID:11290297] Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11290297] Akasaka T, van Lohuizen M, van der Lugt N, Mizutani-Koseki Y, Kanno M, Taniguchi M, Vidal M, Alkema M, Berns A, Koseki H 2001 Mice doubly deficient for the Polycomb Group genes Mel18 and Bmi1 reveal synergy and requirement for maintenance but not initiation of Hox gene expression. Development (128):1587-97
Links:MGI:1933568 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI