Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:668

Msx2 homeobox, msh-like 2 ( MGI:97169)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:668 EMAGE:668
Fig 3E Trainor et al, 2002 [PMID:11807035] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright. Fig 3F Trainor et al, 2002 [PMID:11807035] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
E - lateral view. F - dorsal view. Only the data in E has been spatially mapped in this EMAGE entry however data depicted in both images E and F has been text annotated. Image annotations: ba - branchial arch, r - rhombomere, ov - otic vesicle.
Expression Pattern Description
Spatial Annotation:
EMAGE:668Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
668_wholemount_strong_3D_1.wlz
668_wholemount_possible_3D_1.wlz
668_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:668_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
strong strong
regionalExpression in the distal halves of the branchial arches
2nd branchial arch
strong strong
regionalExpression in the distal halves of the branchial arches
future hindbrain
detected detected
regionalExpression is reduced in the hindbrain but elevated in the roof plate
rhombomere 01 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 02 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 03 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 07 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 05 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 06 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 04 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
rhombomere 08 roof plate
detected detected
Expression is reduced in the hindbrain but elevated in the roof plate
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2158673
Entity Detected:Msx2, homeobox, msh-like 2 ( MGI:97169)
Notes:The Msx2 probe used in this study by Trainor et al, 2002 [PMID:11807035] is of unspecified sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6 x CBA
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Staining procedure:undefined
General Information
Authors:Trainor et al, 2002 [PMID:11807035] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11807035] Trainor PA, Sobieszczuk D, Wilkinson D, Krumlauf R 2002 Signalling between the hindbrain and paraxial tissues dictates neural crest migration pathways. Development (129):433-42
Links:MGI:2158676 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI