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EMAGE:680

Six1 sine oculis-related homeobox 1 homolog (Drosophila) ( MGI:102780)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:680
Figure 3B of Oliver et al., 1995 [PMID:7720577] Copyright: This image is from Development and is displayed with the permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: H - head; OV - otic vesicle; SC - spinal cord; So - somites; He - heart; PSM - presomitic mesoderm; arrowhead indicates nephrogenic cord.
Expression Pattern Description
Spatial Annotation:
EMAGE:680Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
680_wholemount_strong_3D_1.wlz
680_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:680_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
otocyst
detected detected
Expression detected in otic vesicle, nephrogenic cord and presomitic mesoderm.
nephric cord
detected detected
Expression detected in otic vesicle, nephrogenic cord and presomitic mesoderm.
tail unsegmented mesenchyme
detected detected
Expression detected in otic vesicle, nephrogenic cord and presomitic mesoderm.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:23832
Entity Detected:Six1, sine oculis-related homeobox 1 homolog (Drosophila) ( MGI:102780)
Notes:The Six1 probe used in this study by Oliver et al., 1995 [PMID:7720577] is described as being generated from one of "various Bluescript KS II+ subclones containing different coding regions of Six1".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + unspecified
General Information
Authors:Oliver et al., 1995 [PMID:7720577] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:7720577] Oliver G, Wehr R, Jenkins NA, Copeland NG, Cheyette BN, Hartenstein V, Zipursky SL, Gruss P 1995 Homeobox genes and connective tissue patterning. Development (121):693-705
Links:MGI:2148797 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI