EMAGE mouse gene expression spatial database

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EMAGE:7413

Zfp619 zinc finger protein 619 ( MGI:1917477)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_005202. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_005202_01	euxassay_005202_02	euxassay_005202_03	euxassay_005202_04

euxassay_005202_05	euxassay_005202_06	euxassay_005202_07	euxassay_005202_08	euxassay_005202_09

euxassay_005202_10	euxassay_005202_11	euxassay_005202_12	euxassay_005202_13	euxassay_005202_14

euxassay_005202_15	euxassay_005202_16	euxassay_005202_17	euxassay_005202_18	euxassay_005202_19

euxassay_005202_20	euxassay_005202_21

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

7413_wholemount_strong.wlz

7413_wholemount_moderate.wlz

7413_wholemount_weak.wlz

7413_wholemount_possible.wlz

7413_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:7413_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T7630
Entity Detected:	Zfp619, zinc finger protein 619 ( MGI:1917477)
Sequence:	sense strand is shown >T7630 AAGAGGTAATCCCTTTAAGGCTGAGCGAGGTGCCACTTGAGCCGCGCTTGCGAGCTCCGCTGCCAGGACC TGTGGGGAGAGTGCAGTCGAGATCGGAAGCCGCGCCATGGACTTGGTGACCTTTGAGGATGTGGCTGTGA ACTTCACCCAGGAAGAGTGGACTTTGCTGGATCCTTCTCAGAAGAACCTATACATTAATGTGATGCTGGA GACCTGCAGTAACCTTGCTTCTGTGGGAATCAAATCAGAATACCAGACCATTGAAGACCAGTATAAACAG CCTGGGAAAAATATAAGGAACATCATAACCCGCTCCGGATACACTCCATACGCACTTGAGGACTGTGGGG AGAAGCCATATCACTCCAGTTCTCTCACAACAATTCACATATACGTGGGAATCCACACTGTGAGCGGAGC GTATGGATATGAAGTGTATTCAAAACCTGTGGGTGCTCCAAGTTCATGTGGCACTGGTGAGCAAATTCAG AGTGGAGAGCAGCCCCATGGATATACTATAAACAAAACAGCCTTTATTTGCCCCAGCTCATTTTGCAGCA GCGAAGTAACTGACACTGAAGAAAACCCTTCTGAATGTAAACCAGGTGGTACAACTCTGAGTCCTTTCAA TTACCCGCCGTTTTGCAGTGGAACTCATAATGGAGGAAAGCATGTTGACTGTACACAGTGTGTAAAGGCT TTCAGATGTCACAGTTCCCTTCAGAGACAGGAAAGAATGTGTGCTGAGGAAAAACCCTATGAATGTAAAC AGTGTGGTAAGTCATTCGTTTACCCCTATTTACTTAAAATGCATGAAAGGCATCATACGGGAGAGAAGCT TTATAAGTGTAAGACATGTGGTAAGGCATTTCTTTGTTCCTCTTTCCTGCAAAGACATAAAAGAACTCAT ACAGGAGAAAAACCCTATAAATGTAAGCAGTGTGCTAAGCCCTTTAGACGCCTCAGTAATCTTCAGGTCC ACGAGAGAACTCACAGTGGAGAGAAACCCTATGAGTGTAGAGAATGCGGTAAAGCTCTGAGAAGCCACAG TTCCCTTCAAAGACATAAAATAGTCCACGCTGGGAAGAAACCCTACGAATGTAAGCAGTGTGGTAAGTCC TTCATTTATCCCTACTTACTTCAAACCCACGAAAGATCCCATACTGGAGAGAAGCCCTACAAATGTCCCC TGTGCAGTAAAGCCTTTCGTTGTTCCTCTTTCCTGCAAAGACATGAAAGAACTCACACCGGGGGAAAACC CTACGAGTGTAAGCAGTGTGGTAAGGCTTTCAAAGGGCACAGCTCCCTTCGCTTGCATGCAAGGTCTCAC GGCGGGGAGAAGCCATATAAATGTAATCTATGTAGTAAAGCTTTCCTGTGCCCCTCTTTCCTCCGAAGAC ACGAAAGAACTCACACTAGGGAACGGCCCTACGAATGCAGGAAGTGTAACAAAGCCTTCCGAGGTCAGAG TTCTCTTAAGTTACATGAACGATCTCATACCGGAGAGAAACCCTATAAATGTAAGATCTGTAGTAAAGCC TTTCTATGCTCCTCCTTCCTCCAAAGACATGAAAGGATTCACTGTGAAGAAAAGCCCTATGTGTGTAAGC AGTCTGGAAAAGACCTTAAAGATAGAAGTTCCTTTCAAAGACAGAAAGTGTCTCATGCTGGCGAAAAGCC TTATGAGTGTAAGCAGTGTGGTAAGTCCTTCGTTTACCCGTGTTTACTTCAAGTTCACGTCAGAACCCAC ACTGGTGAGAAACCCTATAGGTGTAAACAGTGTGACAAGGCTTTCAGAAGTCTCAGTTACCTTCGCATAC ATGAAGGAAGTCACACCGAGGAAAAGCCCTATGAATGTAAAGAGTGCGGCAAAACCCTCAGCTGCTCCAG CGCCCTGCAGTTACACACACGGACACACACGGGAGAGAAGCCCTATGTGTGTCAACAGTGTGGGAAAGCC TTCAGGGGATTCAGTTACCTCCGCGTCCACGAAAGGACCCACACTGAAGCCAAGCCCTACGAGTGCAAGC AGTGTGGGAAAATTCTCAGCTGCTCGAGTTCCCTTCAACTGCACGAAAGAACCCACACTGGGGAGAAACC TTACTCGTGTAACCAGTGCGGGAAAGCCTTCAGAGGTCTCAGCCGTCTCCGAGTCCACGAGATAATTCAT ACCGGCGAAAAACCCCACGAATGTAAACTCTGCGGGAAAGCTTTCCGGTATCGGAGTTTACTTCGCGTCC ACGAAAGGACCCACACCGGTGAAAAACCCTATGCTTGTAAACAATGCAGCAAAGCCTTCAAAAGCCTCAG TAACCTGCGGATACACGAGAAGACTCACAGTGGGTTCTATGAGTGTAAGCAGTGTGGCAAAACCCTCAGT TCTTCCAACTCCCTCCAAGTACACGAAAGGGTCCACAGTGAAGAAAAATCGCACGCGTGTAAGCAGTGTG GCAAAACCTTCCGCCGGCTCAGTTATCTCCAGGTCCATGAAAAAACTCACGCCGAAGGGAAGCCCTACGA GTGCAAGCAATGCGCTAAGTCCTTCCTTTATCAGTATTTACTCGAAAAGCATGAAAAGTCTCACACTGCA GAAAAGCCCTATAAATGCATGATCTGCAGTAAAGCCTTTATCTGTGCCTCTTTCCTTCAACGGCACGAAA GGATTCATAGCGCAGAAAAACCCTATGAGTGTGTACAGTGTGGCAAAGCGTTCAAAGGCCTCAGTTCCCT TCAGCTACACGAAAGAGCCCACGCTAGAGAAAAGCATTATGACTGTACACAGTGTGGTAAAACCTTCAGA TGTCACAGTCTCCTCCAGGCGCATGAAAGAACCCATACCGGTGAAAAACCCTTCGTGTGTGCAGAGTGTG GCAAAACCTTCAAAAGTGCGGGTTACCTTCGAATTCATGAAAAAACACACAGTGGTTTCTATGAGTGTAA GCAGTGTGGTAAGATTCTCAGCTGTTCAAGTTCTCTTCAGTTACACGAAAGAACCCACACCGGCGAAAAA CCCTACGAATGTAAGCAATGTGGTAAGGCCTTCAGAAGTCAGAGTTCCCTTAGAAGACACGAAAGGATTC ACGCCGGAGAGAAACCCTACGAATGCAAGCAGTGTGGGAAGTCCTTCATTTATCCATGCTACCTTCAAAT GCACGAGAGATCTCACACCGGAGAGAAGCTCTATAAATGTAAAATATGTAGTAAAGCCTTTCTTTATCCC TGTTTCCTTCAAATGCACGAAAGAACTCACACCGGCGAAAAACCTTATAAATGCAAGCAATGTGCTAAAG CCTTCCGAAGTCACAATTCCCTTCAAATGCATGAAAAAACGCATACAGGAGACAGACCCTATGAATGCAA GCAGTGCGGGAAAGTCTTGATAAGTCATAGTTCTCTTCAGAGGCATAAAATAGCTCATGCCGGGAGGAAA CGTTACGAATGTAAACAGTGTGGTAAGTCCTTTGCGTATCCATATTTACTTCAAACTCATGAACGATCTC ACACTGGAGAGAAGCCCTATGAGTGCAAGGACTGCAGGAAAGCCTTTACTTGTCACCGTTCCCTTCAGAG ACACAGAAAAACACACACCTGAGGGGAAGGCTCTGTAAATGCAAACTAGATTAGACTACCTAGTTCTCTT CAAATGTGTGAAAGTACTGGGAAAAAGAGCTAATGAATGTAAAACAAATGCTGAAGTTTGTTGTTGTTGT TATTGCTGTAGTTTGCTATGGAAAGTTTAGAAGGATTCATTTGGGGGAGGGGAACCCTTGAATTGTGCTA AGACCCTCAGTTCCATTTGAAGACATGAAACTACCTGGTGTTAAAACTCAGAATGTAATATGGTATTTCA TTTCTTAGATCTACTAAAAAATACATAAGCTAATGAAGGTAGTCACTTGGGAAGTAAAGCTTGTATTTTA ACAATACTAAAAATCATGTGATAACTCTGATTAGGGGATCTTACAAATCTATGTGTATCCTGAGCTTGTT CCCGCCCGCAGAAACACACACAGGACACGCCAGATTCTTCCGTGGTTAACTTTACTTCATAACATATTGT GGTAGACAAAGAAGGCTCAGAAAGTATGTGGCTTAAATACCCTTAAGGCGTGACGTGTCTAAACTAGGAC TGGTAGCTACACCCACGAACCTCATGCACCCTAGGGATAGGCTAAACGCCCCAGGGGTTGGGCTAGTGCC CTGGGGGATGGACCGTGCCCGGAAATGGGCTGGTGACTTTTGGCGGGTTTTTGCTTTTAGCACATGCGCA TATAGCTTGTTCTTTGTTTAGGTGGTATAAGGCACTGCGGAGCCAGCACCATCTTAAGATGGTAAATGTT ATTGCGGCTCTCTACACTATGTGTGTTGAAATGTTGAAGCAAATCATGCTAAAAGCTTTATAACATGAAT AAAAAGCTATGCATTTTATGAATGTATGGTGGTTTCCAGTGATTTGCATTTGAAGATATTCCCAGCTGCC CCTGATAGATCAGGCCGGTACTCTTGGGTACTCTGGTTTGCTGCAGCTGATAGCAAGTTCAGGGCCAGCC CAGACAACTTAGTGAGACCAGTCTCAATAAAAAATTGGAAAGAAAACCAAAGCCACTCATTAATTGAGCT CTGGTCTCCCAGTGTAATTTCTAGTCCTAGCATAAGAGAAATGAGAAGGCGCCTAGGTGATGAATTTCCA TTTCTTTTACAGGAAAACACTGAAGTGAAAGTTTCCTAAGTGTAGACATGAACTTTAACTGCAGAAATAG CTGATGCAGATTGCTAGACAATCTCTTAATTACCATAGATGTACCTGATAGTGTAGCCCACCATACACTT ATGCTACATGGTATCAGTACTCCACTAGTCTGTGGAATGTCGCTTCATTGTATATTTTAGGCATGGTACC AACAAATATGTATCAAAAAAACATTTGGCATGAAAGTAAATGCTGTATCTATGAAGAGTACTTATTGTGA GTGGAGTTTTGAGGACTGGATTTTATTCAATCAGAGACTTAGGTGAATATAAACTCCTAGGACACATTAA TCTACTGTAAAGTTTCAATACTATAGACTTAGTTTATTGTATATTGATGTTTTCCTAAATATTAAACTAA CTTAAAGCTTTATACAGTGTGTATAATTTTAATACTTTTGATTTTTGTGAGAACAGTGCTTAAAATGTAG CCATTTTATGATTGTTTAAAACTATTTCTTTGTATGCATATTCTATATATATTTTTGCATTATAAATACG TTTTTAAAAACATTGTGAAAACCAGCTGTCACTTAGAACAGAGGCAGGAGGGTTGGTATAGCTTTCAGAT CTATATGCACTGATTCCCATGTGCTCCCACATCACTCCCCTACGTTGTATCGTATGATTAACTGCACCTT CCTTTGTTCTGATCATATGACATTGGCATTGCATGTGATGTCATCCCATGCAATGCCTACTAACAGCTCC TTGAAGCACCTCAGCTCACACACAAGACTTGCTGAATGTTGCAAACGGAAGTACTTTTACTAAATAACCA GACTTTTCGGCTCTTATGGAAATAATGATTTCGTTGTGGGAAACAGACCGTCCTGTTTTTCCAGTGTCAT TCATCAGCATGTAAGTACTAGATTAACTTATCTTTCCATTATACTGTAGAGTTTACCTTTAAAAGTTGCC TGAGTTACTGACTTGTATTTTATTGAAAAAGAATCATTCAATAATTATTGGGTTTCAATAATGAAAAATA TTTTTAACAACTTATGAAATGGTCCTATCTGTATTTCTGCCTAGTATTTTATGTGATGTTCTTTATATTT TCCAAGTATAAAGCCAAAGTATCAACTCTGAAAAACATTGATTCCCTGTTCACTGCATTATCAAATACTC AGCCAAGATTTACTCTTTTATGTAAAAATAAGTATGCCTATTTTATTAATGTACAAGCTTAACTTTCATA ATAAATGATAAAATTATCTAGTTAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:30432277 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30432277 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:7414 same embryo
	EMAGE:7416 same embryo
	EMAGE:7412 same embryo
	EMAGE:7417 same embryo
	EMAGE:7415 same embryo
	EurExpress:euxassay_005202 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source